Brachypodium distachyon (stiff brome): 104582373
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Entry
104582373 CDS
T01717
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
104582373
Membrane trafficking [BR:
bdi04131
]
Autophagy
Other autophagy associated proteins
Others
104582373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
BCAS3_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
PD40
WD40_MABP1-WDR62_1st
Ge1_WD40
RMC1_N
WD40_CDC20-Fz
WDR55
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
104582373
NCBI-ProteinID:
XP_024313473
UniProt:
I1H632
LinkDB
All DBs
Position
1:63502613..63505127
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AA seq
388 aa
AA seq
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MASSATPTTRARPTPPVPSPVAHLSFSSDYSCFIVAGASAAHWLCCDTLEPRGLYQERDP
AAATIVAVAGDMLNPKESRCAVVSLDAAKTNFTVRRWKPGHMNYHWRYAEEEATLQAAEA
EAVLAVRVHGDRIVLVYPRRLEVLGSSWRDVDGPVLLHRVETGENPLGLCAVSSSSSQGQ
GSGSDDLFAYACPGEKVGEVRVERWEAAAGASPVAVAIRAHSSELKCVAMSCDGGLVATA
SVKGTVLRVFRAADGKLLLEVRRGSDSADIHCIAFSPDSKWLAVSSDKATMHVFSVVDVD
SPAEANANKRSSLSFLGLGGSALGYFLSEWSFAQFRVEEGRKYLVAFGKQLCTVHIIGMD
GSFYRCQFNPEKGGQMERLEFRNFINPQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggcgactccgacgacgagggctcgacccacgcctcccgtgccgtccccc
gtcgcccacctctccttcagcagcgattactcctgcttcatcgtggccggcgcatccgcc
gcgcactggctctgctgcgacaccttggagccgcgcggcctctaccaggagcgagacccc
gccgcggccaccatcgtggccgtggccggcgacatgctgaaccccaaggagtcgaggtgc
gcagtcgtgagcctcgacgccgcgaagaccaacttcaccgtcaggcgctggaagccgggc
cacatgaactaccactggcggtacgcggaggaggaagcgactctgcaggccgcggaagcc
gaagccgtgctggcggtgcgcgtccacggggacaggatcgtcctcgtgtacccccgccgg
ctggaagtgctcgggtcctcctggagggacgtcgacgggcccgtgcttctccaccgggtg
gagaccggggaaaatcccctcggcctgtgcgccgtgtcgtcgtcgtcttcgcaaggccag
ggatcaggatcagacgacttgttcgcgtatgcgtgccccggcgagaaggttggggaggtg
cgcgttgagcgttgggaggcggcggccggggcgtcgccggtggcggtggccatacgcgcg
cactcgtccgaactcaagtgcgtggccatgtcctgcgacgggggcctcgtcgccaccgct
agcgtcaagggcaccgtcctgcgcgtcttccgtgccgccgacggcaagctgctcctggag
gtgaggagaggctcagacagtgcagacatccactgcattgccttctcgccggactccaaa
tggttggccgtctccagcgacaaggcaaccatgcacgtctttagcgtcgtcgatgttgat
tctcctgcagaggccaatgccaacaagaggtcatcgctgtcgttcctcggcctcggaggc
tctgcgttgggatattttctttcagaatggtcctttgctcagttccgcgtcgaggaaggc
aggaagtatttggtggcgttcggtaagcaactgtgcacagttcacatcatcggcatggac
ggaagtttctaccggtgccaattcaacccagagaaaggaggccaaatggagcggctggag
ttcagaaacttcataaatccacaataa
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