Brachypodium distachyon (stiff brome): 104582498
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Entry
104582498 CDS
T01717
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
104582498
Membrane trafficking [BR:
bdi04131
]
Autophagy
Other autophagy associated proteins
Others
104582498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
104582498
NCBI-ProteinID:
XP_010230495
UniProt:
I1HCD3
LinkDB
All DBs
Position
2:2946943..2951244
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AA seq
418 aa
AA seq
DB search
MSSQVSTSRGLHPPGKIMTFESPHTWPLSGPTSQAEAGSGDDQEVRLLSVSWNQDFGCFA
AGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNMQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLGKDYIVIVLETKIYVYNFTDLKMLHQIETLPNPKGLCYL
SHHANTSVLACPGLRQGHVRVEHFGLKVTKMIAAHDSHISCMALTMDGLLLATASVKGTL
IRIFNTMDGSRLQEVRRGLDKAEIYSIALSSNVQWLAVSSDKGTVHIFSLKVRVAGEDAS
NDQRTLEAPRMDHQNSSSSMDPLIQTNMGSNASSSLSFMKGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCVFDQVNGGQMSQKEYSRFLKTDYAPSMRTLSV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacaagtctccacctcacggggcttacacccccctgggaaaattatgacgttc
gagtcccctcacacatggcccctgtcgggacctaccagccaggcggaagcaggcagcggc
gatgaccaggaggttaggctgttgtcggtttcttggaatcaggacttcggttgcttcgca
gctggcaccagcaatggcttcaggatctttaattgcgacccttttaaggaaactttcagg
agggatctgaagagtggtgggtttgggattgttgagatgctgtttcgctgcaacatcctt
gctcttgttggtggtggctccaatatgcagtatccgcccaacaaggtgatgatctgggat
gatcaccagagccgttgtattggggaattcgccttccgctctgatgttcgggccgtaaaa
ctggggaaggactacattgtgattgtccttgaaacaaagatatatgtttacaacttcaca
gatttgaagatgctccatcagattgagaccctgccaaatcccaaaggattgtgctacctc
tctcatcatgccaatacttcagtgttggcctgccctgggctgcgtcaggggcatgttcgg
gtagagcattttggtctgaaagtgacgaagatgattgcagctcatgattcacacatttct
tgcatggcgttgaccatggatggtctcttactggcaacggcaagtgtgaagggtacttta
atcagaatattcaacacaatggatggctctcgcctgcaagaggtgcgcagaggtcttgat
aaagcagagatatacagcattgcactatcgtccaatgtgcagtggttggcagtgtccagt
gacaaaggaacagttcatattttcagtctaaaagtcagggttgcaggggaagatgcaagt
aatgatcagcgtactcttgaagctccacggatggatcaccagaactcttcaagctctatg
gatcctctcatacaaacaaacatgggatccaatgcaagctcatcattatctttcatgaaa
gggattcttccaaagtatttcagctcagagtggtcttttgctcagttccatctgccagaa
gtcacacgttacattgttgcttttggcgctcagaacactgtaatgatggttggccttgat
ggcagcttctacaggtgcgtctttgaccaagtaaacggcgggcagatgtcgcagaaggaa
tactcccggtttctgaagactgactacgctccctcaatgaggacgctgtccgtctga
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