Brachypodium distachyon (stiff brome): 104583017
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Entry
104583017 CDS
T01717
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104583017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
104583017
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104583017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
104583017
NCBI-ProteinID:
XP_024315635
UniProt:
A0A0Q3ME81
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All DBs
Position
2:complement(2159738..2161136)
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AA seq
322 aa
AA seq
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MEMKRKEQDGADVDERWEAFLEAQQTGRFAQFYRCRPMSLLDKKNAEDYDQGNKVIMPQS
ALERLSSINVQFPMVFSIENEGGGERGRSHCGVHEFVAEEGFVHLPTQMMEQLGVAAGEG
GLVMMRNAELPKATFLKLQPHSSAFLNIRDLKDLMSYNFGRYACVTEGDTIAVREKLHGL
GGRGGGEAVYRFDVIEARPGGAVSTVETDCEVDFAVPLDYKEPVLATPVPVPAAEAAEGP
RRFAGVGFRMDGKPVEQERAPAAPAKGDQGKRVLQFGGASAAAAGGAAAGGKKVGGGEEE
EKKPAAARFTGKMYSLQSQSKD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagcggaaggagcaggacggcgccgacgttgacgagcggtgggaggcgttc
ctggaggcgcagcagacggggcggttcgcgcagttctaccggtgccggcccatgtcgctg
ctggacaagaagaacgccgaggactacgaccagggcaacaaggtcatcatgccgcagtcg
gccctcgagaggctcagctccatcaacgtgcagttcccgatggtgttctcgatcgagaac
gagggcggcggggagcgggggaggtcgcactgcggcgtgcacgagttcgtggcggaggaa
gggttcgtgcacctgccgacgcagatgatggagcagctgggcgtggcggccggagaaggc
gggcttgtgatgatgcgcaacgccgagctccccaaggccaccttcctgaagctccagccc
cactcctccgccttcctcaacatccgcgacctcaaagacctgatgagctacaacttcggg
aggtacgcgtgcgtgacggagggggacacgatcgccgtcagggagaagctccacggcctc
ggcggccgcggcggcggagaggcggtgtaccggttcgacgtgatcgaggcgcggccgggg
ggcgccgtgtcgacggtggagacggactgcgaggtcgacttcgccgtgccgctcgactac
aaggagccggtgctcgcgacgccggtgcctgtgccggctgcggaggcggcggaggggccg
cggcggttcgcgggcgtcgggttccggatggacggcaagccggtggagcaggagcgggcg
ccggcggctccggcgaagggtgatcaggggaagcgggtgcttcagttcggaggcgcgtcg
gccgccgccgctggtggtgctgctgcaggagggaagaaggtgggcggcggcgaggaggag
gagaagaagcctgctgctgcccggtttaccggcaagatgtactctctgcagagccaaagc
aaagactga
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