Brachypodium distachyon (stiff brome): 104583109
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Entry
104583109 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104583109
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104583109
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104583109
NCBI-ProteinID:
XP_024314525
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Position
2:15939598..15944208
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AA seq
230 aa
AA seq
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MALRARTTPLLPAALAVAFLLSSAAEARVLLTLDDFGAVGDGIANDTQLLLAFVEAWSAA
CAMGDNTYLNVPAGKSYQIWPVTLAGPCRGEIKLLVLVHFNFQPLWSVSSQTQQXNQAAP
KAVHFEGCEDVSVMGITVQNSPRQHLAFTRYYNVKANYLQVTAPEGSPGTVGVLLASSTN
VHVMDDLFSVGGDCVSIVGNCTDVRLRSVSCGPGAGRISSQFCNLISICL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgtgcaaggacgacgccgcttctgcccgcggctctcgccgtggcgttcctc
ctgtcaagcgccgccgaggcacgcgtcctcctcacgctcgacgacttcggcgccgtcggg
gacggcattgccaacgacacccagcttctcctggcgttcgtcgaggcctggagcgcggca
tgcgccatgggcgacaacacgtacctcaacgtccccgccggcaagtcctaccagatctgg
cccgtcacgctcgccggcccctgccgcggcgaaatcaagctcctggtactagtgcacttc
aatttccagcctctgtggtctgtttcctcacagactcaacagntaaaccaggcggctccc
aaggcggtccacttcgagggctgcgaggacgtgagcgtcatggggatcacggtgcagaac
agcccgcggcagcacctggccttcacccgctactacaacgtcaaggccaactacctgcag
gtgaccgcgccggagggcagccccggcaccgtcggcgtgctgctcgccagctccaccaac
gtgcacgtcatggacgacctcttctccgtcggtggcgattgtgtgtcgattgtggggaat
tgcacggatgtgcgtctcagatccgtctcgtgcggaccaggcgccggtagaatttccagc
caattttgcaacttaatctcgatttgcctatga
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