Brachypodium distachyon (stiff brome): 104583742
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Entry
104583742 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
104583742
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104583742
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104583742
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf-RING_4
zf-RING_6
zf-RING_10
zf-RING_11
Zn_ribbon_6
zf-ANAPC11
zf-Vps39_C
zf-Nse
zf-P11
TRAF3_RING
Rtf2
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
104583742
NCBI-ProteinID:
XP_010235330
UniProt:
A0A0Q3HZR9
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All DBs
Position
3:complement(42761683..42764758)
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AA seq
206 aa
AA seq
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MSAVSTAARSRRRAQEDGLAREKAVVVDLEAAGSPVAGGGDSRRVAPIPGTPAGTQGSPI
DVEALVDGEGSRNRRGVQFVVDLEVDTVQQGCNDDVITVHSFIGSKRRREQRASIQRNND
VRLSRSSANVAPKNILKKVAPPPKEPAFTCSVCLNKLEQASTTTCGHVFCENCIKTAIKA
QKKCPTCRKKLGPRSYHRVYLPTTTD
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggttagcaccgccgcgcgctcgaggaggcgggcgcaggaggatggtttggcg
agggagaaggcggtggtggtggacttggaagcggctggatctcccgtcgcagggggcggg
gacagccggcgcgtggctccaatccctggcacccctgccggcacgcagggctcgcccatt
gatgtcgaagctctagtagacggcgaggggagcaggaacaggagaggagttcaattcgtg
gtggatctggaggtggatactgtccagcaaggttgcaacgatgatgtgattacggttcac
agttttattgggagcaagcgtcggagggaacaaagagctagtattcagcgaaacaacgat
gtacgactcagtagatcaagtgccaatgttgctccaaagaatattctaaaaaaagttgct
cctcctccaaaggagccggccttcacctgctcggtgtgtctaaacaaactggagcaggcg
tccacgactacctgtggccatgtcttctgtgagaattgcatcaagacggccatcaaggct
cagaagaaatgtcctacctgcaggaagaagctggggccgaggagctaccatcgtgtctac
ctcccgacgactactgattag
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