KEGG   Brachypodium distachyon (stiff brome): 104583742
Entry
104583742         CDS       T01717                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bdi04121]
    104583742
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104583742
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104583742
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 Prok-RING_4 zf-RING_4 zf-RING_6 zf-RING_10 zf-RING_11 Zn_ribbon_6 zf-ANAPC11 zf-Vps39_C zf-Nse zf-P11 TRAF3_RING Rtf2 ZnF_RZ-type
Other DBs
NCBI-GeneID: 104583742
NCBI-ProteinID: XP_010235330
UniProt: A0A0Q3HZR9
LinkDB
Position
3:complement(42761683..42764758)
AA seq 206 aa
MSAVSTAARSRRRAQEDGLAREKAVVVDLEAAGSPVAGGGDSRRVAPIPGTPAGTQGSPI
DVEALVDGEGSRNRRGVQFVVDLEVDTVQQGCNDDVITVHSFIGSKRRREQRASIQRNND
VRLSRSSANVAPKNILKKVAPPPKEPAFTCSVCLNKLEQASTTTCGHVFCENCIKTAIKA
QKKCPTCRKKLGPRSYHRVYLPTTTD
NT seq 621 nt   +upstreamnt  +downstreamnt
atgagcgcggttagcaccgccgcgcgctcgaggaggcgggcgcaggaggatggtttggcg
agggagaaggcggtggtggtggacttggaagcggctggatctcccgtcgcagggggcggg
gacagccggcgcgtggctccaatccctggcacccctgccggcacgcagggctcgcccatt
gatgtcgaagctctagtagacggcgaggggagcaggaacaggagaggagttcaattcgtg
gtggatctggaggtggatactgtccagcaaggttgcaacgatgatgtgattacggttcac
agttttattgggagcaagcgtcggagggaacaaagagctagtattcagcgaaacaacgat
gtacgactcagtagatcaagtgccaatgttgctccaaagaatattctaaaaaaagttgct
cctcctccaaaggagccggccttcacctgctcggtgtgtctaaacaaactggagcaggcg
tccacgactacctgtggccatgtcttctgtgagaattgcatcaagacggccatcaaggct
cagaagaaatgtcctacctgcaggaagaagctggggccgaggagctaccatcgtgtctac
ctcccgacgactactgattag

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