Brachypodium distachyon (stiff brome): 104585217
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Entry
104585217 CDS
T01717
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-1
KO
K03265
peptide chain release factor subunit 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104585217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
104585217
03012 Translation factors [BR:
bdi03012
]
104585217
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104585217
Translation factors [BR:
bdi03012
]
Eukaryotic type
Release factors
104585217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_3
eRF1_2
eRF1_1
Motif
Other DBs
NCBI-GeneID:
104585217
NCBI-ProteinID:
XP_010239560
LinkDB
All DBs
Position
4:48005849..48007281
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AA seq
456 aa
AA seq
DB search
MDELSHLPDIDAKEGGLDLDGEEGGLDVDGEEEGGLDLVDDEERGGVDEGRGGVDEGGGG
GYPIVLLSDLSYLATDVARLSSAMKAIGAHKGNLITLVLPSSIKINVVLNSLALEYDSTV
DGDKRAAISVVQNKLKLYGEVPPNGLVLYCGTISGKEQEVCCAIEPPRAVKFCMYRYGNK
FHTEVLDELVQRKYGYVVVHAKGAIFGVAVGDNSKILQTLSVDTPSKYGKMLSSTRCFLK
MRMETQHRLVNDTTKLARDIFINPETDVPMIHHLIVVGSADRMPALKCLISALKEPDLFD
HRLERKIVGVVGICNPPCDHEQMFRLAVRRTSTYHDDSELQEMLLNRYIKYVKDDKCVCG
LQKNTLAAAQLGLMDTLYVWEDLVLNQESNQSNFADEPAILEVKERRSVVDWLLSNYVQF
GYCIEIVKPGPPDEPVTSTVNTFCKGLHGIGGILRM
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacgagttaagccacctccccgacatcgacgccaaggagggaggactcgacttggac
ggcgaggagggaggactcgacgtcgacggggaggaggagggaggactcgaccttgtcgac
gatgaggaaagaggcggcgttgacgagggaagaggcggcgtcgacgagggaggaggaggc
gggtacccgatcgttctcctgagcgacttgtcctacctcgctactgatgttgcaaggcta
agcagtgcaatgaaagcaattggggctcataaaggaaatctgattactctggttctaccc
tcaagcatcaagattaatgttgttttgaactcattagcacttgagtatgactctaccgtg
gatggtgacaaaagggctgccatcagtgtagtccaaaacaagctgaagctctatggtgaa
gtgccaccaaatgggttagttctgtactgcgggactatctcaggcaaagagcaagaggtg
tgctgcgcaattgagccacctagggcggtgaaattttgcatgtatcgctatggaaacaag
ttccacactgaggttttggatgaattggtacagcgcaagtatgggtatgtggttgttcat
gcaaaaggagctattttcggtgtagcagttggggataacagtaagatacttcaaactctc
tctgttgacacaccaagcaagtatggaaagatgctgtcatcaactcggtgttttctgaaa
atgcgaatggagacccagcatagacttgtgaacgataccacaaaactggcaagagatatc
ttcatcaatccagagacagatgttccaatgattcatcacctgattgtagttggatcggca
gatcggatgccagcactcaagtgtctgatatcggccctcaaggaacctgatttgtttgat
caccggttggaacgcaagattgttggggtagtcggtatctgcaatccaccgtgtgaccat
gaacagatgtttcgcctggctgttcgcaggacgtccacataccatgacgactcggagctt
caagaaatgctgctgaacaggtacattaagtacgtaaaagatgacaagtgtgtatgtggt
ctccaaaaaaacacgttggctgctgctcaactcggtctaatggatacactttatgtgtgg
gaagatctagtcttaaatcaggagtccaatcaaagcaactttgcagatgagccagcaatc
ctagaagtgaaggagaggagatccgtagttgattggcttctgtcaaactacgtgcagttt
ggttattgcattgagattgtgaaacctggtccacctgacgagccggtgacgtcgactgtc
aacaccttctgcaagggacttcacgggataggaggcattctacgtatgtag
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