Brachypodium distachyon (stiff brome): 106865648
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Entry
106865648 CDS
T01717
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106865648
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106865648
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
106865648
NCBI-ProteinID:
XP_014751715
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
VQSAVFDVKNYGGKADGKSDISKALLGAWKEACSAKGSNIVVVPKGTYSIGLTDLNGPCK
GAMELQVQGTLLAPINPSSYAKDSWITFAYIDQFKLSGGGTFDGQGQVAWKQNNCGRNPK
CKRLPVSLRFDFITNSVVQDVTSLDSKNFHVNLLGGKNLTFDRFTITAPGDSVNTDGIHI
GHSNGINIINSNIATGDDCISIGGASEQIRITNVRCGHGHGISVGSLGKTTDEFVSGIFV
RNCTFYDTDNGVRIKTWPALHGGMASDMHFEDIMMKNVRNPIIIDQMYCPWNQCNPKLPS
KVKISNVTFKNIRGSSATAVAVRLNCSSSFPCQKVELADINLTYGGKEGPVKSLCANVKP
TLKGKLTPTIC
NT seq
1117 nt
NT seq
+upstream
nt +downstream
nt
agttcaatctgccgtatttgatgtgaaaaattatggtggtaaagccgatggcaagtcaga
tattagcaaggcattattgggcgcgtggaaagaggcttgttcagcaaagggttccaacat
agttgtagtacccaaaggaacatattccataggtttaactgacttaaatggtccatgcaa
gggagccatggagcttcaagtccaaggaaccttattggcaccgataaaccctagcagtta
tgccaaggacagctggattacttttgcatacattgatcaattcaaattatccggtggtgg
aaccttcgacggacaagggcaagtggcttggaagcaaaataactgcggtcgaaatccaaa
atgcaagagacttccagttagcttgcggtttgacttcatcaccaacagcgtagttcagga
cgtaacatcgctcgatagtaagaatttccatgtcaatcttctaggtggcaaaaaccttac
tttcgatcgcttcacgatcactgcaccaggagatagcgtcaatacagatggaattcacat
cgggcattcaaacgggatcaacattattaattcaaatattgccaccggcgatgactgcat
ctccattggtggtgccagcgaacaaataaggatcacaaacgtacgatgtggacatggaca
tggcattagcgtgggaagtttagggaagaccactgatgaatttgtctctggaattttcgt
aaggaactgcaccttctatgacaccgacaatggagtgagaattaagacatggccggcatt
acatggtggcatggcctctgatatgcatttcgaggatattatgatgaaaaatgtccgcaa
ccctatcattatagatcaaatgtactgcccatggaatcagtgcaatccaaagcttccgtc
aaaagttaagatctccaacgtcaccttcaagaatattaggggctcttcagcgaccgcagt
agctgttcgacttaattgcagcagcagttttccatgccagaaggtcgagctcgctgacat
taacttgacgtacggaggaaaggaaggccctgtaaaatccttgtgtgcaaatgttaaacc
cacacttaagggaaaattgactccaaccatttgctag
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