Brachypodium distachyon (stiff brome): 112269372
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Entry
112269372 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC112269372
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112269372
03015 mRNA surveillance pathway
112269372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
112269372
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112269372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112269372
NCBI-ProteinID:
XP_024311810
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All DBs
Position
5:10031980..10046204
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AA seq
298 aa
AA seq
DB search
MAVSNIELKEIIQETETVLGAIAVDSIQRRAKTAKNPFCRPASRPAAGHRCGRRWRSPAT
VRRPPRSPNPAHTPLKLPCAVHLEHGIIIHSLLKKVHHQGKVTQHHPRAKKASPPRKFNN
AKASPAPESTVLFVEPLSRNVDETRLYQIFAYFGEVANVQIPMNETANLPHDYGYIHFKK
RADAERALRYMDGGQIDGNDVKLSFVVAPQKQDSSSMNAHPNGPKADAPQNDKVLLLKRM
LSNILGNHLRQEKNLLLCESGLLHIKGLRHPTVNLRGVVLILLLFVITQTRTLSGLVT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcaacattgaactgaaagagatcatccaggagactgaaacagtcctcggg
gccattgctgtcgattctattcagcgaagggccaaaacagcaaaaaatcccttctgtcgc
ccagccagccggcccgccgccgggcaccgttgtgggagacgatggcgaagccccgccacg
gttcgcaggccaccgcgatctcccaaccccgctcatactcccctgaagttgccgtgcgct
gttcatctggaacacgggataatcattcattcactcctaaaaaaggttcaccatcaagga
aaggtcactcaacatcacccccgagctaaaaaagcttcacctcctagaaagttcaataac
gcgaaagcatctcctgctcctgagtcgactgttcttttcgttgaacctctatcacggaat
gtcgacgagactcgtctgtaccaaatatttgcatattttggcgaggtggcaaatgtgcag
ataccaatgaacgaaactgctaatcttccacatgactatggatacattcatttcaagaag
agggctgatgctgagagggctcttcgctacatggatggtggtcaaattgatggaaatgat
gttaagttgagtttcgtagtagcaccacaaaaacaagattcttcatctatgaacgcacac
cccaatggtccaaaagcagacgctccccagaatgataaagtactcttgctgaaaaggatg
ctcagcaacatcctagggaaccatcttcgccaagaaaagaaccttctcctttgcgaaagc
ggtctcctccatatcaaagggttgaggcacccaacagtcaatctccgaggtgtcgtgcta
attctccttctttttgtcatcacgcagacccgtactttgtcaggtttggtgacatga
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