Brachypodium distachyon (stiff brome): 112270555
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Entry
112270555 CDS
T01717
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112270555
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112270555
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
112270555
NCBI-ProteinID:
XP_024313988
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Position
2:3167792..3170085
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AA seq
475 aa
AA seq
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MLKRQGIWAGRTFFVLLLVLAVRSAAAARSPVLAAKARKQGRYSVLDFHAAGDGKTDDAP
VTASVTHSPCFCSIVHYHGKAFLEAWQTACSDGSSPVLVIPGGWTFLLSKIRFQGSCKSP
ITVQLDGNIVAPNYIWTAESDNLLTFYRIDNLTVAGNGQIDGRGAIWWSCYNHKLSQRCT
HRPNVSTHTISPSVSFMWTLRLVHVNQLLAFAYCNNLWVRNIHLKDSAEKHMTLYRCSQA
HVDSVSVTAPAHSPNTDGINMALSDHVYISSCSMQTGKSPFIEYMHGTNAGDDCVSILSG
TTDAYVTDTTCGPGHGIRYKCATMCMQTCDECTNLSSIYVHVCLAFVSSYLLMVAYWGGT
GKANGFLFENLNMTAVRFPIDIDQFYCPPGNCPTRDGGVAITDARFINIHGTSSEKQAIQ
ILCSQSVPCRGIYLHDVTLYWNKKNHVSQAQSRILNAHGTIVGNVVPEVQFITAQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacggcaggggatttgggcaggacgtaccttcttcgtgctattgcttgtgttg
gccgttcgttcggcggcggcggctcgatcaccagttctggcggcgaaggcaaggaagcag
ggaagatacagcgtcttggatttccatgctgctggggatggcaagacagatgatgcgccg
gtaacagctagcgtaacccactctccatgtttttgttctattgttcactatcatggaaag
gcgttcctggaggcatggcaaacagcttgcagcgacggcagctcgcctgtcctggtcatc
cctggaggatggacattcttgctgagcaaaatcaggtttcaggggtcctgcaagtcgccc
atcaccgtacagctggacgggaacatcgtggcgccaaactacatttggacagcggaatca
gataacctcctgaccttctacagaatcgacaacttgacggtggctgggaatggccagatc
gacggccgcggcgccatttggtggtcttgctacaaccataagctttcacagagatgcacc
caccggccaaatgtaagtacacacacaatatctccttccgtttcattcatgtggacactg
aggcttgtccatgtaaatcagctgctggcattcgcatattgcaacaatctgtgggtgaga
aacatacatttgaaggacagtgccgagaagcacatgacattgtaccggtgcagccaggcg
catgtggacagcgtgtccgttaccgcaccagcccatagtccaaacacagacgggattaac
atggcactttctgaccatgtttatatctcgtcttgctctatgcaaaccggtaagagtcct
ttcattgagtacatgcatgggacaaatgcaggagatgattgtgtatcaattctatcgggc
acaactgatgcttatgttaccgacaccacctgtgggcctggtcatggcatcaggtacaaa
tgtgcaaccatgtgtatgcagacctgtgatgagtgtacgaacttaagcagcatctacgtg
catgtgtgccttgcatttgtttcaagttatttactgatggttgcatattggggaggaacg
ggcaaagcaaacggattcctttttgagaacctcaacatgactgcagtccgatttcctatt
gacatcgaccagttttattgtcccccaggaaattgtccaacaagggatgggggtgtggcc
ataactgatgcacgatttatcaacatccacggtacatcctctgaaaaacaggccatccaa
attttgtgcagccaaagtgtaccctgccgtggcatctatctccatgatgttaccctctat
tggaacaagaaaaaccatgtttcccaagcacaatcaagaattctaaatgcccatggaacc
attgtgggcaatgtggtacctgaagtgcagttcataacggctcaatag
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