Brachypodium distachyon (stiff brome): 112270910
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Entry
112270910 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
112270910
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112270910
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112270910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
HydF_tetramer
Motif
Other DBs
NCBI-GeneID:
112270910
NCBI-ProteinID:
XP_024315295
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All DBs
Position
2:39801904..39805109
Genome browser
AA seq
382 aa
AA seq
DB search
MAMRGVDFKWYDGFFLSMLATSVIIVSINWRRYRLCAHPLHIWIVVDYTTVFVFRLLMFL
DNGLAAGMGLDLGWQQRYTRFCGRILVLSLLILLLYPFLWVWTVIGTLWFSTARGCLPEE
GQKWGFLIWLLFSYCGLACIACVAVGKWLNRRLALQLRAQQGIPVSEYGVLLDMIRVPDW
AFEAVGLELRGMGQDTAYHPGLYLTTAQREAVEALIQELPKFMLKAVPTDCSECPICLEE
FRVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNGLRPSSETDHAP
SGTGSSSEVTGTTTAAVASRYVRAQQPSGQRCLVQLQGLLLRPVVGVGDPESGMPVSSVS
GPEVVPSSSRVVVAADELLPDR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggggcgtcgatttcaagtggtacgatggcttcttcctctccatgctcgcc
accagcgtaatcatcgtctccatcaactggaggaggtaccgcctctgcgcgcacccgctc
cacatatggatcgtcgtcgactacaccaccgtcttcgtcttccgcctcctcatgttcctc
gacaacggactcgctgcagggatgggactggatcttggatggcaacagagatatacccgt
ttctgtgggagaatacttgttctctcacttcttatacttcttctctatccctttctgtgg
gtttggactgtcataggaacattgtggtttagcactgcaagaggctgtttgcctgaggaa
ggtcaaaaatggggcttcttgatatggttgcttttcagttactgtgggctcgcctgtatt
gcatgtgtggctgttggaaagtggctaaaccgaagacttgcactccaactgagggcacaa
cagggaattccagtctctgaatatggggttttgctcgacatgatacgtgtgcctgactgg
gcatttgaggcagttgggttggaactgagaggaatgggccaagataccgcatatcatcct
ggcctttatttaacgacagcccagagagaagcagtggaggcactgattcaggagcttcca
aagttcatgctgaaggcagtcccgacggactgcagcgagtgcccgatctgcctggaggag
ttccgggtgggcaacgaggtgcggggcttgccgtgcgcccacaacttccacgtggagtgc
atcgaccagtggctgcggctgaatgtcaagtgcccgcggtgccggtgctccgtgttcccc
aacctggatctgagcgcgctcaacggcctgcgccccagcagcgagacggaccacgcgccg
tcgggcacgggcagcagcagcgaggtgactggtacgacgacggcagcggtggcgagccgg
tacgtgagggcgcagcagccgtcagggcagaggtgcctggtgcagctgcaggggctgctg
ctccggccggtggtcggagtaggtgacccggagagtggcatgcctgtttcatcggtttcc
gggcctgaggtagtgcctagcagtagcagggttgtagtagctgctgatgagctgctgcca
gaccgttga
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