Bdellovibrio sp. KM01: HW988_00025
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Entry
HW988_00025 CDS
T08445
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdk03032
]
HW988_00025 (gyrA)
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_00025 (gyrA)
Enzymes [BR:
bdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HW988_00025 (gyrA)
DNA replication proteins [BR:
bdk03032
]
Prokaryotic type
DNA Topoisomerases
HW988_00025 (gyrA)
DNA repair and recombination proteins [BR:
bdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HW988_00025 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Pep3_Vps18
Beta-prop_NUP159_NUP214
SH3_19
Motif
Other DBs
NCBI-ProteinID:
QLY25486
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Position
6426..8915
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AA seq
829 aa
AA seq
DB search
MENSNQEKGVTVVDISKEMRGAYLQYSMSVIVGRALPDVRDGLKPVHRRVLFAQSEMNNR
HNRPYLKSARVVGDVIGKYHPHGDSAVYETMVRMAQDFSLRYPLEDGQGNFGSIDGDSAA
AMRYTEIRMTPMAEELLNDLEKETVAFGPNYDDSLQIPLVLPAKFPNLLVNGSSGIAVGM
ATNIPPHNLGEVIDGTIHLINNPTCQLEDLMVHIKGPDFPSAGVIAGREGILQAYKKGRG
IISLKAVAEIVPNKDREDIIITEIPYQVNKAKLIESIADLVRDKAIEGISDIRDESSREG
MRIVINLKRGENASVILNRLYKFTQMQVSVGIIMLALDAKNQPVTFDLKGMLEAFVDHRR
DVVTKRCIFELKKAQERAHILEGLKKALDHIEEVIKTIRASKEAHAAREALMSKFEFSER
QAVAILEMRLQRLTGLERDKIIEELAELQKTIDWLKFVLADVREIYKIIVGELEDMKKRY
ADPRRTQLQGSLDDIEDEDLIADEDMVVTVTNTGLIKRMPTAEYRVQKRGGKGLKGMETK
EEDYVTDLFSASTKTMLLVFTDKGKVYWVKVHKLPLGSRTSKGKSLANVVQLASGESVRA
ILPVDEFNENKFAVMLTEKGIIKKTSLDSFANPRTAGVIALTTDLDDGIIAVKISDGQSD
IFIATKEGMSIRFNENDVRGMGRTARGVKAITLAKDDVVVAMEVLEKNTPDTILMVTSKG
YGKRSEVGEYRVQSRGGVGIITQKTTDKVGSVVGTKKVSEKHELILSTDNGQVIRMKMTD
ISVLGRNTQGVRLINIDEKDETVTGLAVVEDDHSDEAASAPTAPEGVTH
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagtaatcaagaaaaaggcgtcacggttgtcgatatcagcaaggaaatgcga
ggagcataccttcagtactcgatgtcagttatcgtgggtcgtgcacttccagacgtacgt
gatggtttgaaacctgttcatcgtcgtgttcttttcgcacaaagtgaaatgaacaaccgt
cacaacagaccgtatttgaaatctgcccgtgtggtgggtgacgtcatcggtaaataccat
ccgcatggtgactcggctgtttacgaaacgatggttcgtatggcccaggacttctctctt
cgctacccgcttgaagatggtcaaggtaacttcggttctatcgacggcgacagcgcagca
gccatgcgttatacggaaatccgtatgactccgatggcagaagaacttctgaatgattta
gaaaaagaaactgtcgcgttcggtccgaactacgatgactctttgcaaatcccattggta
ttgccagcgaaattcccaaatcttttggtgaatggttcttctggtatcgcggttggtatg
gcgacaaatattccgccacacaatttgggtgaagtgatcgatggtacaatacatttgatc
aacaacccaacttgccaacttgaagacttgatggtgcacatcaagggacctgacttccct
tctgcgggtgtgattgcaggacgtgaaggtatcttgcaggcttacaagaaaggccgcggt
atcatttcacttaaagcggttgcggaaatcgttccaaacaaagaccgtgaggatatcatc
atcacggaaatcccgtaccaagttaataaagcgaaacttatcgaaagcatcgcggacctg
gttcgtgacaaagcaatcgaaggtatctctgatatccgtgatgaatcttctcgtgaaggt
atgcgtatcgtgatcaatctaaaacgtggcgaaaacgcttccgttattttgaatcgcttg
tacaaattcactcagatgcaagtttcagttggtatcatcatgcttgcgcttgatgcgaaa
aaccaaccggtcactttcgatttgaaaggcatgcttgaggccttcgtagatcaccgtcgt
gacgtcgttacgaaacgttgtatcttcgaacttaaaaaagcccaagaacgcgcgcacatc
ttggaaggtttaaaaaaagccctagatcacatcgaagaagttatcaagacgatccgtgct
tccaaggaagcgcacgcagctcgtgaagccttgatgtctaaattcgaattctctgaacgc
caagcagttgcaatcctggaaatgcgtttgcaacgtttaactggtttagagcgtgataaa
atcatcgaagaacttgctgaacttcaaaaaacaatcgattggttgaaattcgttttggcc
gatgttcgcgaaatctacaaaattatcgtaggcgaacttgaagacatgaaaaaacgttat
gcagatcctcgtcgtacacaacttcaaggcagcctggatgacatcgaagacgaagatttg
atcgctgacgaagatatggttgtgactgtcacaaacacaggtctgatcaagcgtatgcca
acagctgaataccgtgttcaaaaacgtggtggtaaaggcttgaaaggcatggaaacaaaa
gaagaagactatgtaacagacttgttctctgcttccacaaaaacgatgcttctggtgttt
actgataaaggtaaagtgtactgggtgaaagttcataaacttccacttggcagcagaact
tcaaaaggtaagtcattggcaaatgttgtccaacttgcttcaggcgaaagtgttcgtgcg
attcttccggtggatgaattcaacgaaaacaaattcgctgttatgttgactgaaaaaggt
attatcaaaaaaacatctttggattcattcgctaatccaagaactgcgggtgttatcgct
ctgacgacagatcttgatgacggtattatcgctgttaagatttctgatggtcagtcagac
atcttcatcgcaactaaagaaggtatgtcgattcgtttcaacgaaaacgacgtgcgtgga
atgggtcgtactgcccgcggcgtgaaagcaatcactcttgcgaaagacgacgtagttgtg
gcgatggaagtgcttgagaaaaatactccagatacaatcttgatggtaacgtctaaaggt
tacggtaagcgctcagaagtgggtgaataccgtgttcaatctcgtggtggtgtaggtatc
atcactcagaaaacgacggacaaagttggtagcgttgtcggtaccaaaaaagtttctgag
aaacacgaattgattctttcaacagacaatgggcaagttatccgtatgaaaatgacggac
atctctgttcttggccgtaacactcaaggtgttcgtttgattaacatcgacgaaaaagac
gagacagtaactggtttggcagtggttgaagacgatcactctgatgaagcagcttctgct
ccgactgcacctgaaggcgtaactcactag
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