Bdellovibrio sp. KM01: HW988_00240
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Entry
HW988_00240 CDS
T08445
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00470
D-Amino acid metabolism
bdk00550
Peptidoglycan biosynthesis
bdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HW988_00240 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HW988_00240 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
HW988_00240 (murD)
Enzymes [BR:
bdk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HW988_00240 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
Precursor biosynthesis
Amino acid ligase
HW988_00240 (murD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
SLT_L
MptE-like
Motif
Other DBs
NCBI-ProteinID:
QLY27232
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Position
complement(45990..47246)
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AA seq
418 aa
AA seq
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MGKSGDSAKRLLVACGISPENILTFDGKLDSADFKDSNKLMSEGKPQTLVVSPGVPLASA
WIKDAKNQGIRITSEITLACSCLSTEKLIGVTGSVGKSTTVSLLQAGLEGFSKNGFVGGN
LGIPFATYAAEVVEKKRPVADWVVLELSSYQLENCDLLSLDYSAITYFTSNHLERYDSIE
HYYQTKWSILGMTKNKMLLNSEGGDLIEYSKAQKPSNQVKVVSKKDSELQSYQLQKAQLI
GQHNQDNMALATALAMEAGWPNAAVEAMKNFKGLSHRLENLGEVKGVRFINDSKATALDS
VMIAATAASDTLHPDGVLFLLLGGRDKNLPWEQLSSLSKMNRTEFVFFGECRAIAQSKSQ
LKGNSFARLDEAIGYIFSKVKAADTVLLSPGGTSLDEFKSFEDRGDFFKMKVSEFSIL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagcggagactccgcgaagcgcttacttgtggcttgcggaatcagcccagaa
aacattctaactttcgacggaaaactggattcagctgacttcaaggattcaaataaactc
atgtctgaaggtaaaccacagactcttgtggtttctcccggcgttcccttggcatctgca
tggatcaaagacgcaaaaaatcaggggattcgcatcaccagtgaaatcactttggcgtgc
tcatgtttgtccactgaaaaactaatcggtgttaccggatcagtaggaaaaagtacgacg
gtgtctcttcttcaggctggtcttgagggcttttccaaaaatggctttgttggcggcaat
ttgggaattccttttgcgacctacgccgcggaagtagttgaaaagaagcgtcccgtcgct
gactgggttgtcttagaactttccagctatcagttggaaaattgcgatcttttgtctttg
gattattcagccatcacctacttcacttcgaatcatttagagcgatacgacagcatcgag
cactactatcaaactaagtggagtatcttgggaatgaccaagaataagatgcttttaaat
tcagagggtggtgacttgatcgagtactcaaaggcccagaagccctcaaatcaagtcaaa
gtggtctccaaaaaagactccgaacttcagtcctatcagttgcaaaaagcgcaactaatt
ggccaacacaatcaggataacatggcgctggcaacagcactagccatggaggccggatgg
ccaaacgcggctgttgaagcgatgaaaaactttaaaggtcttagccaccgcttggaaaat
ctgggtgaggtcaagggcgtgcgtttcattaacgacagcaaggccacggcacttgatagt
gtgatgatcgctgctactgcagcttccgatactcttcatcctgacggagttttatttttg
cttttgggtggcagagacaaaaatcttccatgggaacagttgtcgtctttgtctaaaatg
aatcgcactgaattcgtattttttggtgagtgccgagctattgctcaaagcaaatctcaa
cttaagggaaatagtttcgcccgcctggatgaagctatcggatacatcttttcaaaggta
aaagccgccgacacagttttgttaagccctggcggaacaagccttgatgaatttaaatca
tttgaagatcgcggagatttctttaaaatgaaggtttctgagttttctattctctaa
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