Bdellovibrio sp. KM01: HW988_00295
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Entry
HW988_00295 CDS
T08445
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW988_00295 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdk03021
]
HW988_00295 (rho)
03019 Messenger RNA biogenesis [BR:
bdk03019
]
HW988_00295 (rho)
Transcription machinery [BR:
bdk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HW988_00295 (rho)
Messenger RNA biogenesis [BR:
bdk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HW988_00295 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
AAA_22
AAA_25
Spore_III_AA
ATPase_2
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
QLY25538
UniProt:
A0A7H9MMA9
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All DBs
Position
58086..59834
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AA seq
582 aa
AA seq
DB search
MSEPKDSSGVEVVKKRTRTTKSAEAAPVESAPEVTAAPVAAEPPPQAPAAPAPAEASAAG
SSEPAPQQQQQRQDRPQQHQRRDFRPSNRDNRDNRGDRNDRGDRNDRNDRNDRDRGPRHN
NGPRRDFHRGRNEDHQPGGDDQNATQQQPDVDLADIQLTDEEKSWLSSKDLKSKNITQLT
ELATKLKIENAAGLRRQDMIFEILKRAAKLGQDIYGSGVLEILPDGYGFLRSPDYNYLPG
PDDIYVSPSQIRRFGLRTGDTVTGTVRPPKEGERYFALLKVDSLNFETTEKGKDKILFDN
LTPLYPNKRLKLEHNPGDYTTRVVDLMAPLGKGQRALIVAPPRTGKTVLMQQIANAITAN
HPEVKLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPPTRHVQVAEMVIEKAKRLVEHKH
DVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIAT
ALIDTGSRMDEVIFEEFKGTGNAEIHLDRKLMEKRIFPCMDINKSGTRKEDLLIDKADLN
RLWILRKVLAPMNVVDAMDFLLDKVGNTKSNADFLKAMSGNG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgaaccaaaagattcatcaggcgttgaagtcgttaaaaaacgcactcgcaccacg
aagtctgcagaagcagctccagtagagtctgcaccagaagtcactgcagcacctgtcgca
gcagaacctcctccccaagcacccgctgcaccagctccagctgaagcctccgcagccggt
tcttcagagccagctccacagcaacaacaacaaagacaagatcgtccacaacaacaccaa
cgtcgtgatttccgccccagcaatagagacaaccgcgataatcgcggcgaccgcaatgac
cgtggtgatagaaatgacagaaacgatcgtaacgacagagaccgtggcccccgccacaac
aatggccctcgtcgtgacttccaccgcggaagaaatgaagaccaccagccaggtggtgat
gatcaaaacgcaactcaacaacagcctgatgtagatttggcagacatccaactgactgac
gaagagaaatcttggttatcgtctaaggatttgaaatccaaaaacatcactcagctgact
gagcttgctacaaaacttaaaatcgaaaatgctgccggtcttcgccgtcaggatatgatt
tttgaaatcttgaaacgtgcagcgaaacttggtcaggacatttacggttctggtgttctt
gaaatcctgccggacggttacggtttcttgcgttcgccagactataactaccttccaggt
ccggatgatatctacgtttctccttctcaaatccgtcgcttcggcttgagaacgggtgac
acggtgacaggtactgttcgtccaccaaaagagggcgagcgttacttcgcacttttgaaa
gttgattctctaaacttcgagacaactgaaaaaggtaaagacaaaatcttgttcgacaac
ttgacgccgctttacccaaataagcgtttgaaacttgaacacaatccgggcgattacacg
actcgtgttgtggacttgatggcgccacttggaaaaggtcaacgcgcattgatcgttgct
cctccaagaacaggtaaaacagttcttatgcaacaaatcgccaacgcgattactgcaaat
cacccagaagtgaagttgatcgttctattgatcgatgaacgtccggaagaggtgacagac
atgcaacgtaccgttaaaggtgaagttgtatcgtcaacgttcgatgaaccaccaactcgt
cacgttcaagttgcagagatggttatcgaaaaagcaaaacgtttggttgagcacaagcat
gacgtcgttatcctgcttgattccatcactcgtttggcccgcgcatacaacacggttgtt
ccgccgtcaggaaaaatcttgtcaggtggtgtggactccaacgctcttcacaagccaaaa
cgtttcttcggtgctgctcgtaacatcgaagagggtggatctttgacgatcatcgcaaca
gcgttgatcgacacaggttctcgtatggatgaagttatcttcgaggaatttaaaggtacc
ggtaatgccgagatccacttggatcgtaagcttatggaaaaacgtatcttcccttgtatg
gacatcaataaatcaggtactcgtaaagaggacttgttgattgataaagcagacttgaac
cgtctgtggatcctaagaaaagtattggcacctatgaacgttgtcgatgcgatggacttc
ttgttggataaagtgggtaacactaagtccaacgctgacttcttgaaagcgatgtccgga
aacggataa
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