Bdellovibrio sp. KM01: HW988_02605
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Entry
HW988_02605 CDS
T08445
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdk01002
]
HW988_02605
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
HW988_02605
Peptidases and inhibitors [BR:
bdk01002
]
Cysteine peptidases
Family C82
HW988_02605
Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HW988_02605
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GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QLY25947
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Position
507115..508695
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AA seq
526 aa
AA seq
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MNIFWKRILVLLVAFGFYSADKSYAQFEAQNPFLEMERQFTPGDYTRLFSNMSVDDMRAT
MLKSWVHGVNPVYYWRPDMEKAFQEGGATSPGLKAKADENYLKLLQDISIGSANPVMMGT
DVKFVQKKFLSPKYLQMLISSSGSRPDLLVDNLAPQNPPYNALKAAIAKVYPACGDGTWT
PLKPFKKPLKLGMKNPGVIDLKKRLSLLGYPIVNFDETFDREAQLAVNDIQWNLHWKPDG
ILSPGGRTWNFLSVSCKDRTRQIQADMEKMRWFPQTFPERYIFVNTAMTYFGMIDKTQPE
RFTIAFKTINGRPERKTPTMADSLVRVILNPFWIVPPTIFIQDKVEDIKKLNYWEINAYF
DSHNYEVWNKEFTRRLDPASINWWAYDSTQDADIYIRQKPHLGNALGIVKFELTNSFAIY
LHDTNQRELFVEANRQLSSGCVRLEKPLDLAEYLLRGTPWDRQAIENTIAKPGQVMTKDT
KIPLKEPVAVYIGFITSQMFSDKVIRFTTDSYNQNAKVLSLMRAPF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttctggaaaagaattctcgttctcttggtggcttttggcttttattctgct
gataaaagttatgcgcagtttgaagcccagaaccctttcctggaaatggaacggcagttt
actcctggggactacacgcgccttttttcgaatatgagtgtcgacgatatgcgagcgaca
atgttgaaatcctgggtgcacggtgtgaatcccgtttattattggcgccctgatatggaa
aaagcttttcaagagggcggagcgacctctcccggattgaaagcgaaagccgacgagaac
tatctaaaactcttgcaggatatttccatcggaagtgccaatcccgttatgatgggcaca
gatgttaagttcgtgcagaaaaaattcctgtctccaaaatatctacaaatgctgatcagc
tccagcggctcgcgcccggatctgttggtggataatctggcgccgcaaaatcctccttat
aatgcgcttaaggccgcgattgcaaaagtctatccagcttgtggcgatggcacttggaca
cctttgaaaccatttaaaaaacctttaaagcttgggatgaaaaaccctggtgtgattgat
ttgaaaaaacggttaagtcttctgggctatccgatcgtgaatttcgacgaaacgtttgat
cgggaagcacaactcgctgtgaatgatatccagtggaatcttcattggaagcctgatggt
attctttctccgggtggtcgcacatggaattttttaagtgtttcttgtaaggaccgcaca
cgccagattcaagcagacatggagaaaatgcgctggttcccgcaaacattcccagagaga
tatatttttgtaaataccgcgatgacctactttgggatgatcgacaaaactcaacctgaa
cgatttacgatagcgtttaaaaccatcaatggtcgtcctgaaaggaaaacaccgacaatg
gcggacagcctggtgcgcgtgattttaaatcctttctggattgtgccgccgacgattttc
attcaagacaaagtcgaagatatcaagaaactgaattattgggagatcaatgcttacttt
gactctcacaactatgaagtatggaacaaagagttcacgcgccgcctggatcctgcaagt
attaactggtgggcctacgatagcacacaagacgccgatatttatattcgccaaaaaccc
cacttgggtaatgccctgggtattgtgaagttcgaactgacgaattcttttgcgatatat
ctgcacgacacaaaccaacgggaacttttcgtggaagcgaaccgccaactcagttccgga
tgtgtgcgcttggaaaaaccattggatctggcagagtatctattgcgtggaacgccctgg
gatcgccaagcgattgaaaatacgatcgcaaaacccggtcaggttatgacgaaggatact
aaaatacctttgaaagagccggtcgcggtatatatcggctttatcacttcgcaaatgttc
tctgataaggtgattcgttttacgacggattcctataatcaaaatgcgaaagttctatct
ttgatgagggctcctttttag
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