Bdellovibrio sp. KM01: HW988_03460
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Entry
HW988_03460 CDS
T08445
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_03460
Enzymes [BR:
bdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW988_03460
DNA repair and recombination proteins [BR:
bdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HW988_03460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
QLY26103
UniProt:
A0A7H9MLK9
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Position
690443..693172
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AA seq
909 aa
AA seq
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MLQIVPIENRSQINELFAKYNPREQSWLVSDLRTKFELQQKILARDGQYVDESVLRASDL
WKLLLKRLEPRLRLVSNPFARSILRTVLDENAEALGVNSSAEDTVFSYIDQLAAIIFHPE
GTQKLNDWFEEHPEAKNRWGAWYLRARFCAIQLLEKYNIITAGWITSYLQNFNDLERVWD
IPLIVDLSGEISRVEAEILRTLSRTIDVVVLEPSPTWREEFKYLLRPYEDLRGQSSSIKK
LQPAAPVTKIKEVLRFSGMLAEIKNSVGQVRKWLEAGIPADNIAVIAPDIEQYWPVLQAF
LKEEGIPVQKDITHKIQSLPSATRWLATLRAKSGRLSSSDLEISFFEKHESQALRYEDFK
ALFKSLYVNEDLARNELIHKIYFEQIDLSGPVVRDEFVGKALSFWSSSDTDVVQIVLREL
LQNATANTKLIWKEWLSYLESIVAAKEYNLEKGESSGVLVTKLMSAYSEKARYRIFVGLT
DESLKSRNKTQLSGSDYFDLAKDIGFYLDNPDQSDLAFELKLLAEADSVHDIYCFGGTDL
SGTLCSPSTFWMSLNEGHAHETLTVPLETRWDEIQYSKQGANRTWVDNRKAEIEHKIQLD
LGKADLPLVELKKLPSISASAIESYLECPFIFAAQRYFKLKDLPEVDLDVDHRTRGQLAH
ALFEKLTQEPMRFDWQSAEIEEILESVRKDKNMLFADERLWLPLRKKHVQLAQRFLDFEK
TWRQEYNRTKTLAREKRFEFYLDPKSETLSKEASDGAFRISGSIDRVDTDQDGHLVLLDY
KSSAGGISAHGSWLKNHELQLLFYMWVIEKSLMEEMKGEVIGLFYYIFRTFDRKGFRVND
KAGRLYPATRTKDKNATLEAKELYLTEFSKILMATLERIRLGEIRPAPVDTQICTSCEWR
RQCRAPHLN
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaattgtcccaatcgaaaatcgctcgcagatcaacgagctatttgccaaatac
aatccacgagaacagtcttggctggtttcggatttgcgcaccaaattcgaattgcagcaa
aagatcttagctcgtgacggccaatatgtggacgaatcggttctgcgtgccagcgatttg
tggaagttattgttaaaacgtctggaaccccgtttgcgtttggtgagtaatcccttcgcg
cgttccattttgcgcacagtcttggatgaaaacgccgaagccttgggagtgaattcttcc
gcagaagacacggtcttttcttatattgatcaattagctgcgatcattttccatcccgag
ggaacgcaaaaactcaacgattggttcgaggaacatcccgaagccaaaaatcgttgggga
gcttggtatctgcgtgcccgtttctgcgcgattcagcttttagaaaaatacaacatcatc
acggcgggctggatcacgtcttaccttcaaaacttcaatgaccttgaaagagtttgggat
attccattgatcgtggatttaagcggcgagatctcccgcgtcgaggcggaaattttaaga
actctgtcgcgtacgatcgacgttgtcgtgctggagccatcgcccacgtggcgtgaagaa
tttaaatacctgttgcgaccctatgaagatttacgtgggcaaagttcgtccattaaaaag
cttcagcctgcagctcccgtaactaagatcaaagaagttctgcgcttttctgggatgctt
gcagaaattaaaaactctgtcggtcaggttcgtaaatggttagaggcggggatacctgct
gacaacattgcagtgattgctcccgatatcgagcaatactggcctgtcttgcaagccttc
ctaaaagaggaaggcatccctgttcaaaaagatattacacacaaaatccaaagtttgcct
tcggctacacgttggttggcaactttgcgtgcaaagagtgggcgcctgtcttcatcagat
ttggaaatctcgtttttcgaaaaacatgaatctcaagcgcttcgttatgaagactttaaa
gcattgtttaaaagcctttacgtgaatgaagatctggcccgcaatgaattgatacataaa
atttatttcgagcagattgatttaagcggccccgtggtacgcgatgaatttgttgggaag
gccttaagcttttggagttcctctgatacggacgtcgtgcaaatcgtgttgcgcgaactt
ttgcagaatgcgacggccaataccaaattgatctggaaagaatggctaagctatcttgaa
agtatcgtcgccgccaaagaatacaacctggaaaaaggcgagagttccggcgttctggtc
actaagcttatgtctgcgtacagcgaaaaagctcgttatcgaattttcgtaggactgacg
gatgagtctttaaagtctcgcaataaaacccagctgtcgggctctgattattttgatctt
gccaaagacatcggtttttatctggataatccggatcaaagcgatctggcttttgagtta
aaacttttagcggaagcggattcggttcacgacatctattgtttcggtggcacagatctt
tccggtacactttgttcgccatctactttctggatgagcttaaatgaaggccacgcccac
gaaacattgacagtgccgctggaaactcgttgggatgaaattcagtattcaaagcagggt
gcgaacagaacttgggtcgataatcgtaaagccgaaatcgagcacaaaattcaattggat
cttggaaaagcagatttgcctttggtggaacttaagaagctcccaagcatttctgcctct
gcgattgaaagttatttggagtgtccgtttattttcgcggcccaaagatactttaaactc
aaagacctgcccgaggtggatctggatgtggatcaccgtactcgcgggcagttagcccat
gccttgtttgaaaaactcactcaagagccgatgcgttttgattggcaatctgctgagatc
gaagaaattctggaatcagttcgtaaagacaaaaacatgttgttcgcggatgagcgcctg
tggctgcctttgcgtaaaaagcatgtgcagttggcccaaagattcctggatttcgaaaaa
acctggcgccaggaatacaaccggacaaaaactctggcgcgtgaaaagcgttttgaattt
tacctggatccaaaaagtgaaacccttagtaaggaggccagcgatggcgctttccgaatc
tcgggttctatagaccgtgtggatactgatcaagacggccacttggtgctgttggattat
aaaagctccgctggcggtatctcagcccacggttcatggcttaaaaaccatgaactgcaa
cttttgttttacatgtgggtgattgaaaaatccctgatggaagaaatgaagggcgaagtc
attggcttgttttattatattttccgtacctttgatcgcaaaggtttccgcgttaacgat
aaagcgggccgtttgtatcccgcaactcgcaccaaagataaaaatgccactttggaagcg
aaagaactttatttaacagagttttcaaaaattttgatggcaaccttggaacgtatccgt
ctgggcgagattcgtcccgcaccggtagatacgcaaatttgtacctcgtgtgaatggaga
agacagtgtcgagcaccgcacctcaattaa
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