Bdellovibrio sp. KM01: HW988_03535
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Entry
HW988_03535 CDS
T08445
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdk03019
]
HW988_03535
Messenger RNA biogenesis [BR:
bdk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HW988_03535
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DMPK_coil
Motif
Other DBs
NCBI-ProteinID:
QLY26118
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All DBs
Position
711411..712373
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AA seq
320 aa
AA seq
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MEKKTVQSLQDKDAVDSLFLVKEKNVGVGKNGRAFMGLQLGDATGTIDARLWDRVEELSR
LFETGDVLKVKGQVQLFQNRKQLVIHKLERVENSEVNFEDFIPKSSKNSEDMMAELIQLV
RSMRNDHLRQLVLDTLEDPEIRPRVLRAPAAKSIHHAWVGGLLEHILSICKIMDFMGSHY
PFLNRDLLLFGAIFHDIGKIWELSYDNGVSYTDRGRLLGHMQIACELIDKKAARILGFSE
ELRDICKHIILSHHGKLEYGSPKRPKFMEAMLIAMVDDLDSKVATLKTIVDGERGSGEKW
SRYNELFDRYFLLDDLNEKY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagacagttcaaagtctacaagacaaagacgcagttgattctttattcctg
gttaaggaaaaaaacgtcggcgttggtaaaaacggtcgtgcttttatgggcctacaattg
ggcgatgccacagggactatcgatgcgcgcctttgggatcgtgttgaagagttatcccgt
ttgtttgaaacaggggatgttcttaaagttaaggggcaggttcaattattccaaaatcgt
aaacagctggttatccataagcttgagcgcgttgaaaattccgaagtgaactttgaagac
tttattccaaagtcttcgaaaaattctgaagacatgatggccgagctgattcagcttgta
cgcagtatgcgcaacgatcacttaagacaattggttttggacaccttagaagatcctgag
atccgtcctcgcgttttgcgtgcgcccgcagctaaatccatccaccatgcctgggtgggc
ggcttgctggagcacatcctttcgatttgtaagatcatggactttatgggttcccactat
ccgttcttgaatcgtgatttgcttcttttcggagcaatctttcacgatatcggaaaaatt
tgggagctttcctacgataatggcgtttcctataccgatcgcggacgtctattaggacac
atgcaaattgcttgtgaacttatagataaaaaagcggctcgcatcttgggctttagcgaa
gagctccgcgatatttgtaaacatataatcttgagtcatcatggtaaactggagtacggt
tctcccaagcgtccaaaatttatggaagcgatgttgattgcgatggttgatgatcttgat
agcaaggtcgcaacattgaaaacaatcgtggatggagaacgcggttcaggcgagaaatgg
tctcgttataatgaactgtttgaccgttacttcctccttgatgatttgaatgagaaatat
tga
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