Bdellovibrio sp. KM01: HW988_04445
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Entry
HW988_04445 CDS
T08445
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk02010
ABC transporters
bdk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HW988_04445
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HW988_04445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdk02000
]
HW988_04445
Transporters [BR:
bdk02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HW988_04445
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Motif
Pfam:
Peripla_BP_4
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
QLY26285
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All DBs
Position
888017..889762
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AA seq
581 aa
AA seq
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MKFHSTISFLLLSLASLTAVAKDLDVHVFYWSTRIEAQVSMRRGLEEEIKKYNQTAARSI
NLIPHVAGEGRLGVSNQIHQLESAIEANPDALIVQPTDISTVSRAVQDAGLKKIPVFTFD
QFILNAKVQSYVSSDNYQAGWNNGIYIESLFPRGQEIKIVLFEYTRVSAGINRIDGFFDA
LRSRNRKFVVLKRYESVDPVSASDAVTSMLKEFPKKRSIDLVFTVNDGAGNTVVEKLWNK
GRKEILHATIDGDPVAVGNIKDHRLTVIDSAQFCGEMGREIARQVIAYFSAKPVVPKLLI
PTFPVTRETLAQFKGWLSVPLAPPKSFSDPRSIEPMASLAKDMGNVTIRIGMAAHCPYLC
DKGGDQWTGYVYDILKDLAAKNKFQLKIVNLRNKDLTTALKDKKVDFAVLPSYLVRYQPG
FEIALTKLGVSYTGALFTPGVKLRLVDKNSLENMRVAFATLGQESDFSLDPEEYKKSIKL
EGVEVADKVIKVIGERRVDVALGDYNVIRYTLLRRQLLNLELQATSLTGFNTLSLVSNAG
DTAHADLPIRLQKWFADARSSDKLHKILIRYNLNDWSEFEY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttcatagcacgatctccttcttgttattgtccttagcgagtcttacggctgtt
gccaaggatttagacgtccatgttttttattggagtacgcgtattgaagctcaagtttcg
atgcgccgtggcctcgaggaagaaattaaaaagtacaatcaaactgccgcccgaagcatc
aacctgatcccgcacgtggcgggcgaagggcgtttgggagtttccaatcaaattcatcaa
ttggaaagtgccattgaagccaatccggatgcattgatcgttcagcccacagatatatcc
accgtcagtcgcgcagttcaagatgcgggactcaagaaaataccggtcttcactttcgat
cagtttattttaaacgcaaaagttcaatcctatgtatcaagcgataattatcaagcggga
tggaacaacggaatttatatcgaaagtcttttccccagaggacaagaaataaaaatcgtg
ctgtttgaatacacgcgcgtttctgccgggatcaatcgcatcgatggattttttgatgct
cttcgcagccgtaaccgaaaattcgtggtgctaaagcgctatgagtccgtggatcctgta
agtgcctccgacgccgtcacctctatgctgaaagagtttcctaaaaaacgcagcattgat
ttggttttcacggtgaatgatggcgctggcaatacggtcgtcgaaaaactttggaacaaa
ggcagaaaagaaattctccacgcgaccatcgacggagaccctgtggctgtgggtaatatc
aaagaccatcgtttgacggtgatcgactcggctcaattttgtggagaaatggggcgcgaa
attgccagacaggtaattgcgtatttttctgcaaaacctgtggtgccgaagttattaatt
ccgacttttccagtgactcgggaaactctcgctcaatttaaaggatggttgtcagtaccg
cttgcaccgccaaaaagtttttctgatccgcgttctattgaacccatggcttcgttagcc
aaggacatgggcaatgtgacgattcgtattgggatggcggctcactgtccttatctttgt
gataagggtggagatcaatggacagggtatgtgtatgatattctgaaagacctcgccgct
aagaataagtttcaacttaaaatcgtgaatctgcgcaacaaggaccttacaaccgctttg
aaagacaagaaggtggatttcgcggttttacccagttatctggttcgctatcagccggga
tttgaaattgctctgaccaaattgggtgtcagctatactggtgctctttttactccggga
gtaaaattgcgattggtggataaaaactctttggaaaatatgcgtgtggcctttgccact
ctgggacaggaatcagatttcagtctggatccagaagagtataaaaagtcgatcaaactt
gaaggcgtggaagtcgctgataaagtcatcaaagtgatcggtgagcgtcgcgtggatgtg
gctttgggagattacaacgtgattcgctacactctgctacgccgacaacttttgaatctg
gagctgcaggcgacgtcgctgacgggatttaacactttgagtttagtttccaatgccggc
gatacagcgcacgcggatttgccgatcagactacagaagtggtttgccgacgcacgaagc
tccgacaagctccataagatcttaatcagatataatctcaatgattggtcagaattcgaa
tactag
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