KEGG   Bdellovibrio sp. KM01: HW988_05710
Entry
HW988_05710       CDS       T08445                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bdk  Bdellovibrio sp. KM01
Pathway
bdk00010  Glycolysis / Gluconeogenesis
bdk00020  Citrate cycle (TCA cycle)
bdk00260  Glycine, serine and threonine metabolism
bdk00280  Valine, leucine and isoleucine degradation
bdk00310  Lysine degradation
bdk00380  Tryptophan metabolism
bdk00620  Pyruvate metabolism
bdk00630  Glyoxylate and dicarboxylate metabolism
bdk00640  Propanoate metabolism
bdk00670  One carbon pool by folate
bdk00785  Lipoic acid metabolism
bdk01100  Metabolic pathways
bdk01110  Biosynthesis of secondary metabolites
bdk01120  Microbial metabolism in diverse environments
bdk01200  Carbon metabolism
bdk01210  2-Oxocarboxylic acid metabolism
bdk01240  Biosynthesis of cofactors
Module
bdk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bdk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bdk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bdk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bdk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HW988_05710 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HW988_05710 (lpdA)
   00620 Pyruvate metabolism
    HW988_05710 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HW988_05710 (lpdA)
   00640 Propanoate metabolism
    HW988_05710 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HW988_05710 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HW988_05710 (lpdA)
   00310 Lysine degradation
    HW988_05710 (lpdA)
   00380 Tryptophan metabolism
    HW988_05710 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HW988_05710 (lpdA)
   00670 One carbon pool by folate
    HW988_05710 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdk04147]
    HW988_05710 (lpdA)
Enzymes [BR:bdk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HW988_05710 (lpdA)
Exosome [BR:bdk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HW988_05710 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored FAD_binding_2 NAD_binding_8 Pyr_redox_3 GIDA HI0933_like DAO FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C AA_kinase 3HCDH_N
Other DBs
NCBI-ProteinID: QLY26517
LinkDB
Position
complement(1152227..1153636)
AA seq 469 aa
MSDNQFDLIVIGSGPGGYVGAIRAAQLGLKTAVIEKDKTYGGTCLNVGCIPSKALLESSE
HYVAAQHDFAAHGIKVPKVELDLGTMIARKDKVVKANTDGINFLFKKNKITGINGFGKIL
GAGKVEVKTDDGNTQVLTTKAILIASGSVPVELPFLKYDEKRIVSNTGALILPQVPKTMI
VVGGGVIGLELGSVWQRLGAEVTVIEYTNRLGGATDQDCMNVLKRNLEKEGMKFLLSTKV
TGSNVVADGVEVTYESLTDGKATTAKAEVVLVATGRKPFTTGLGLEETGIQKDPQGRIIV
DAHYQTSVAGVYAIGDVIAGPMLAHKAEEEGVAVAEMLAGGAGHVNYNTVPGVIYTHPEV
ATVGINEEQAKEKGIEINVGKFPFLANGRARAKGFTEGFVKIIADKATDKLLGAHMVGPG
VSELIHEVIVCMEFGGSSEDLARSFHAHPTLSEVVREAALAVEKRARQM
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgtcagacaatcaatttgatcttattgttattggttccggtcccggtggttatgttggc
gcaattcgcgcagctcaattgggattgaaaaccgcagttattgaaaaagacaaaacttac
ggcggcacttgcttaaacgtgggttgcatcccttctaaagctcttttggaaagttctgaa
cactacgtagcggctcaacatgatttcgctgctcacggtatcaaagttcctaaagttgaa
ttggacttgggtacaatgatcgctcgtaaagacaaagtcgttaaagccaacactgatggc
attaacttcctatttaagaaaaataaaatcactggaatcaatggcttcgggaaaatcctg
ggagctggcaaagtagaagtgaaaacagacgacggcaacacacaagtgttaacgacgaaa
gccatcttgattgcttcgggttccgttccagttgaattgccattcctaaagtacgacgaa
aaaagaatcgtttccaacacaggtgccttgatcctgccacaagttcctaaaacgatgatc
gttgtaggtggcggtgtgatcggtcttgagttgggctctgtatggcagcgcctgggggct
gaagtgacagtgatcgagtacacaaaccgcctgggcggcgctacagatcaagactgcatg
aacgttcttaaacgtaacttggaaaaagaaggcatgaagttccttctttcgacgaaagta
actggctctaacgtcgttgctgacggcgttgaagtgacttacgaatctttgactgatggt
aaagcaacaactgcgaaagccgaagttgtactggtagcgacaggtcgcaaaccattcaca
acgggcttgggccttgaagaaactggcatccaaaaagatccgcaaggtcgcatcatcgtc
gatgctcattaccaaacgtcagttgctggggtatacgcgatcggtgacgttatcgccggc
cccatgcttgcgcacaaagcggaagaagaaggtgtcgccgttgcagaaatgctggctgga
ggcgcaggtcacgtgaactacaacacagttccaggcgtgatttacactcacccagaagtg
gcgactgtaggtatcaacgaagagcaagctaaagaaaaaggtatcgaaatcaacgtgggt
aaattcccattcctggcaaacggccgtgcccgcgcgaaaggcttcactgaaggtttcgta
aaaatcatcgcggataaggccacagataagcttttgggcgctcacatggtgggtcctggc
gtttctgagctgatccacgaagtgatcgtgtgcatggagttcggtggcagcagtgaagat
cttgcaagatccttccacgcccaccctactttgtcagaagttgtgcgcgaagccgccctt
gcggttgaaaaacgcgcccgtcagatgtaa

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