Bdellovibrio sp. KM01: HW988_07605
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Entry
HW988_07605 CDS
T08445
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdk03016
]
HW988_07605 (truB)
Enzymes [BR:
bdk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HW988_07605 (truB)
Transfer RNA biogenesis [BR:
bdk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HW988_07605 (truB)
Prokaryotic type
HW988_07605 (truB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Gasdermin
UfSP_MPN_N
Motif
Other DBs
NCBI-ProteinID:
QLY26852
LinkDB
All DBs
Position
1553224..1554183
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AA seq
319 aa
AA seq
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MTNNSENSKTPPAKRISVDFNGLLLVDKPSGISSHDVVSRLRRIMGTKSVGHSGTLDPMA
SGLMACLINEATKLSQYILEGDKGYRVRIQFGIRTDTLDTTGETLETKPVNLVQETLLAE
AMKLQGEMEVEVPIYSAIKVQGKKLYEYARQDKDVVIPKKVMNFWDVQFLGMGEDWAEFD
LRCSKGSYIRTWVDLLGQALGCGAAMSALRRTYSAPYHLQQGQTLEAIEECVKKSTFSPA
FVAMDAALPMVKRIRVKGQDQVLLGNGQISHDLRSQLIAVFKPDEDQYVQILALEGGKLL
AIVGLEPGRGFVLKRVFKY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataattctgaaaattcaaaaacgcctccggctaaacggatcagcgtcgatttc
aatggtttgttacttgttgataaaccatccggcatttccagccatgacgtggtttcgcgt
ttgcgtcgtattatgggcacaaagtctgtcggtcactccggcaccttggatcctatggcg
tcaggcttgatggcctgcctgatcaatgaagcgaccaagctttctcaatacattctggaa
ggtgacaagggttaccgcgtgcgaattcaatttgggattcgcaccgacaccctggatacc
accggagaaactttggaaaccaagcccgtcaatttggtgcaggaaactttgcttgcggaa
gctatgaagcttcaaggtgagatggaagtggaagttccgatttactcggccatcaaagtt
cagggtaaaaagctatacgaatatgcccgccaggataaagacgttgtgatccctaaaaag
gtcatgaacttctgggatgttcaattcctgggaatgggggaggattgggctgagttcgat
cttcgttgctctaaaggcagctacattcgtacatgggtggatcttttggggcaggctctt
ggctgtggtgcggcgatgagtgctctgcgcagaacttattcagccccctatcatttgcag
caggggcaaaccctggaggccattgaggagtgtgtaaaaaagagcactttttcaccggct
tttgtggcgatggatgccgctttaccgatggtgaagcgtatccgcgtgaagggacaggat
caggtgcttttggggaatggccagatcagccatgacctgcgtagccagcttatagctgtt
tttaagcccgatgaagaccaatacgtgcagattcttgccttggagggtgggaagcttttg
gccattgttggcctcgagccaggacgaggatttgtcctgaagcgcgtattcaaatactaa
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