Bdellovibrio sp. KM01: HW988_09035
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Entry
HW988_09035 CDS
T08445
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00300
Lysine biosynthesis
bdk00470
D-Amino acid metabolism
bdk01100
Metabolic pathways
bdk01110
Biosynthesis of secondary metabolites
bdk01120
Microbial metabolism in diverse environments
bdk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HW988_09035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HW988_09035 (lysA)
Enzymes [BR:
bdk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HW988_09035 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QLY27114
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Position
1849769..1850944
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AA seq
391 aa
AA seq
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MEYINNELHFGPGKKKLSSLCANYIRPIYVYDLDFIRSRFKQMAEALAGVRLYFAVKANP
NPQVLQCLKSAGAGADVVSLGEIKRALESGFLPEDIVYSGVGKTRHEITEALQLGVLQIN
VESLPELERIGEIAEKLGKKAHVALRLNPDVSIQTHPYIATGLRDNKFGMELSMIPELTT
CLKKYANSLELVGVSLHLGSQMLEFSGYQEALMKLKEVFKALQKDFPTLRRFDFGGGLGV
VYEKQDLEMEARLLKEYAGITEEILSDLKCELQSEPGRWLVAHAGTLLTQVQYVKKTSAK
TFIIVDTGMNHLIRPSLYEAEHLIKPLIKSAKQIKCDVVGPICESSDFFLKDYEMDEVKE
GDFLAVLDSGAYGYSMASTYNLQELPLEVCI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtggaatacatcaataatgagcttcattttgggcccggtaaaaagaaattatcttcatta
tgtgcgaactacattcgcccgatctatgtctacgaccttgatttcattcgcagccgcttt
aagcagatggcagaagctcttgctggcgtgcgtttatatttcgccgtgaaagccaacccg
aatcctcaggttttgcaatgtttgaagtcagctggtgcgggggccgatgttgtttccttg
ggggaaatcaaacgcgccttagaaagtggttttctgcctgaggacatcgtttattctggc
gttggaaaaactcgccatgaaattacagaagcgcttcaactcggcgttttgcagatcaac
gtggaaagcttgcccgagcttgagcgtatcggtgaaatcgctgaaaaattgggcaaaaaa
gctcatgtggctttgcgcttgaatcctgatgtgagtattcaaactcatccctatattgcg
acgggattgcgcgataataaattcggtatggaactgtctatgattccagagttgacgacc
tgtttgaaaaaatatgcgaactcgttggagctcgtcggtgtgagtttgcatttgggatct
caaatgttggagttttctggttaccaggaagctttgatgaagcttaaggaagtgtttaaa
gccctgcagaaagacttcccgacccttcgtcgttttgatttcggtggcggcctgggagtt
gtttatgaaaaacaagatctggagatggaggcgcgtcttttaaaagaatatgcgggaatt
actgaagagattctttcggatctaaagtgcgagctgcaatcagagccgggtcgctggttg
gtcgctcacgctggaactttattgactcaagttcaatatgtgaaaaagacctctgcgaaa
actttcatcatcgtggatacgggaatgaaccatctgattcgtccttcgctttatgaagcg
gaacacttgatcaagcctttgataaagtcagcaaaacaaatcaagtgcgatgtcgtcggt
cctatctgcgaatcttcagatttctttttgaaagactatgaaatggatgaagttaaagag
ggagatttcttggctgttttggattccggggcctatggttactcgatggcgagcacgtat
aatcttcaggaacttcctttagaagtctgtatctaa
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