Bdellovibrio sp. KM01: HW988_09580
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Entry
HW988_09580 CDS
T08445
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00260
Glycine, serine and threonine metabolism
bdk00460
Cyanoamino acid metabolism
bdk00630
Glyoxylate and dicarboxylate metabolism
bdk00670
One carbon pool by folate
bdk00680
Methane metabolism
bdk01100
Metabolic pathways
bdk01110
Biosynthesis of secondary metabolites
bdk01120
Microbial metabolism in diverse environments
bdk01200
Carbon metabolism
bdk01230
Biosynthesis of amino acids
bdk01240
Biosynthesis of cofactors
bdk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HW988_09580
09102 Energy metabolism
00680 Methane metabolism
HW988_09580
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HW988_09580
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HW988_09580
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HW988_09580
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HW988_09580
Enzymes [BR:
bdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HW988_09580
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QLY27209
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Position
1956285..1957532
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AA seq
415 aa
AA seq
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MNSTSLTLNQVDPEVFAVIQKESERQQFGLEMIASENYTSKAVMEAQGSILTNKYAEGYP
GKRYYGGCVNVDTIESLAIERAKKLFGMNFANVQPHSGSQANMGVYLAACKAGDTILGMD
LSHGGHLTHGSPVNFSGMLFKAASYKLDPETGRINYDTIRSVAKETKPRLIIAGYSAYPR
VLDFAKFKEIAVEVGADLLVDMAHFAGLVATGHHPSPAEYADYVTTTTHKTLRGPRGGMI
LTNSEEKAKIMNSRIFPGIQGGPLEHVIAGKAVAFGEALKPEFKDYSGKVIQNAKTLSEE
LLSQGFKLVTGGTDNHLMLIDLSDREITGKVAEIALDEAGITVNKNTVPNEKRSPFVTSG
IRIGTPALTTRGMGTSEMKKIGQWIAQVLNNADNADVKNKVHAEVKEMCKHFPIY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgacgtctctaactttaaaccaagttgatcccgaagtatttgcggtgattcaa
aaagaatctgaacgtcaacagttcggtcttgagatgatcgcttctgaaaactacacatca
aaagctgtgatggaagcccaaggctccatcctgacaaacaaatacgctgagggttacccg
ggcaaacgttattacggcggttgtgtcaatgtcgacacgattgagtcacttgcgattgaa
cgtgcgaaaaaacttttcggtatgaactttgcgaacgtacaaccacattcgggttcacaa
gctaacatgggtgtttacctggcagcgtgtaaagctggcgacacaatcctggggatggat
ttgtctcatggtggtcatttgactcacggatctcccgtgaatttctctgggatgcttttc
aaagcggcttcttacaaattggatccagaaacaggtcgtatcaattacgatacaattcgt
tccgtggctaaagaaacaaaacctcgcttgattatcgcgggttattcagcttacccacgt
gttttggatttcgctaaatttaaagaaatcgccgttgaagtgggcgcagatcttttggtg
gatatggcacactttgcaggattggttgcaacaggccaccacccgtctccggctgaatac
gcagattatgtaaccacgacgactcacaaaactttgcgcggacctcgtggcggtatgatt
ctgacgaactctgaagaaaaagcgaagatcatgaactctcgcatcttcccaggcattcaa
ggtggtccattggaacacgtgattgcgggtaaagctgtggcattcggtgaagctttgaaa
cctgaattcaaagactacagcggcaaagttattcagaatgcaaaaacactgtctgaagag
cttttgtcccaaggtttcaaacttgtgactggcggtacggacaatcacttgatgttgatt
gatctttccgatcgtgaaatcacaggtaaagttgcagagattgctttggatgaagctggt
atcactgtgaataaaaacacggtaccgaatgaaaagcgttctccattcgtgacaagtggc
attcgcattggaacacctgctttgacaacacgtggaatgggcacttcagaaatgaagaag
atcggtcaatggattgcgcaggttttgaacaatgctgacaatgcagatgtgaaaaacaaa
gtgcacgccgaggttaaagaaatgtgtaagcactttcctatctactaa
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