Bdellovibrio sp. KM01: HW988_12040
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Entry
HW988_12040 CDS
T08445
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00550
Peptidoglycan biosynthesis
bdk01100
Metabolic pathways
bdk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HW988_12040 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HW988_12040 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
HW988_12040 (mrdA)
Enzymes [BR:
bdk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HW988_12040 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HW988_12040 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
FAM210A-B_dom
Motif
Other DBs
NCBI-ProteinID:
QLY24193
UniProt:
A0A7H9MG30
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All DBs
Position
2470993..2472987
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AA seq
664 aa
AA seq
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MSTYVSNPDEAKEYQSRYRLFYILIAFTFSIFTMRLWYLQIISGNELREFSEKNRIKQNK
ITAPRGLMLDREGKVLVENLPGFEVLLTPQYIEDLQSLAGTIGPILGMDADKVVQKVQKS
RKQNGPFAQIRLKENLSREEVFRLKRVRLDTPGLEIRESIVRYYPLKENGAQLFGYVGEI
SKRQIPIFNDLYKNFLKFDQGDIVGKSGLEETLERDIRGTDGISFIQVDAHGREAVTQTP
NIYGEQIRDQVPVHGNNAVLTIDRDIQEAAYKAFNVTGVDNRGHIGGIMVMKTNGEVLAW
VSAPSFDPNEFSTGISPQTWSRLINDPFKPLRNKIIQDHNPPGSTFKPLVAVAALSEKVI
TPTTIVAAPGVFFFGRRPYHDALKQGHGNITIYQAIEESSNVFFYKMGIALGVDKMYDYI
NPMGIGQKTGVELSREVAGIMPNSAWKKATVGEEWQPGENLSTAIGQGFVTVTPISMAIA
YNAIATEGKVVKPFIIRKVLDQDGKVLRENFPQVVRDLQQPQPNGIKITPETFKVVKEGM
RLVANGNKGTARYWKVPGVEFAGKTGTAQVMGFSADQIHASCTARPIHMRHHGWFVSYAP
AENPEIVIAILAEHSCHGNTGGVPIARDIYNAYFQKYHPDVVANAIKNKGVKKKAEAATT
SEGE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttacgtcagtaatccggatgaggctaaggaatatcaaagccgctaccgtctg
ttctatatattaattgctttcaccttcagcatcttcacgatgcgcttgtggtatttgcaa
atcatttccggtaacgaacttcgcgaattctcggaaaagaatcgtattaagcaaaataaa
atcaccgctccccgcggcctgatgctcgaccgtgaaggaaaagttctggtggaaaatctg
ccgggcttcgaggtcttgctgactcctcaatatatcgaggatctgcaatctttggcggga
actatcggcccgattctgggaatggatgccgataaagtcgttcaaaaagttcaaaagagc
cgcaaacaaaacggtcctttcgcgcaaattcgtttgaaagagaacttaagccgcgaggaa
gtgttccgtttgaaacgtgtgcgcctggatactccgggacttgagattcgtgaatctatc
gtgcgttactacccgctgaaagaaaacggcgcccagctgtttggttacgtgggtgagatc
tcgaaacgtcagatccctatctttaatgatctctacaagaactttttgaaattcgatcag
ggtgacatcgttggtaagagtggcttggaagaaactttggaacgcgacatccgcgggacc
gatggtatctctttcatccaggtcgatgcccatggccgtgaggcagtgacgcaaactccg
aatatttacggcgagcaaatccgcgatcaggttccagtgcatggaaacaatgcggttctt
acgatcgaccgtgatattcaggaagctgcttacaaagccttcaatgttacaggtgtagac
aaccgtggtcacatcggcggtataatggttatgaaaaccaacggtgaagttttggcgtgg
gtttccgctccatcctttgacccgaatgagttttcaacaggtatttcgccacaaacttgg
tctcgcttgatcaacgatccgttcaaaccacttcgtaacaagatcatccaggatcacaac
ccgccaggttctacatttaaaccgttggtggctgtggcggctttgagtgaaaaagttatt
actccaacaacaatcgttgccgccccaggggtgttcttctttggtcgacgtccttatcat
gatgcgcttaaacaaggtcacggtaacatcacgatctaccaagcgatcgaagagtcttcg
aacgtgttcttctataaaatgggtatcgctttgggtgttgataagatgtatgactacatc
aaccctatgggtatcggccaaaaaaccggtgtcgaactttcccgtgaagttgctggtatt
atgccgaactctgcgtggaaaaaagcaaccgttggtgaagaatggcaaccaggtgagaac
ttaagtacagccatcggccaaggtttcgtgactgtgactccgatctctatggccattgct
tacaacgcgattgccactgaaggaaaagttgtgaaacccttcatcatccgcaaagtattg
gatcaggatggtaaagttttgcgcgaaaacttcccgcaagtggtgcgcgatctgcaacag
ccacaaccaaacggtatcaaaatcacacctgagacatttaaagtcgtaaaagaaggtatg
cgtctggtagcgaatggcaacaagggtacggcccgttactggaaagttcctggtgttgag
ttcgcaggtaaaactggtaccgcacaagttatgggcttctcggcggatcaaatccatgcg
agctgtacggcccgccctattcacatgcgacatcacggctggttcgtttcttatgcgccg
gctgaaaacccggaaatcgttattgcgattctggctgaacactcctgccatggtaatacc
ggcggcgtgcctatcgcgcgtgacatttataatgcttacttccagaagtatcatcccgac
gttgtcgccaatgcgattaagaacaaaggcgtaaaaaagaaagccgaagcggcgactacg
agtgaaggagaataa
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