Bdellovibrio sp. KM01: HW988_12960
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Entry
HW988_12960 CDS
T08445
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
HW988_12960
Enzymes [BR:
bdk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HW988_12960
Peptidoglycan biosynthesis and degradation proteins [BR:
bdk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HW988_12960
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_2
SLT_4
Iml2-TPR_39
TPR_8
TPR_19
ARM_TT21
WDR62-MABP1_CC
Ish1
Motif
Other DBs
NCBI-ProteinID:
QLY24369
LinkDB
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Position
2664091..2666178
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AA seq
695 aa
AA seq
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MPRLFIALSFLSVLMGCATTSRQDTRFEKRLIPQDNPEWVRLYLEAAEKKTSAPKLACAN
YKELSNHQDFPIKDLALLRAYESCPADEKLNTLPESINPWYADLFADIRLKESLETSDLK
DDLHAYLAKAGVENNKKKKEDYLQKALAAAKKIDSQEYVVEVQAQLYKISPRLNPTPPFK
ELSAVAMDFRFNRDFDEALGVYKKILSSKEASTDDKFQATKNVRMTYKVAQRRQDYINAT
SELVNTTKKQYRENKKDRKALARYHDALVLLARTLWTEDQTSMAVKTLTEANRQLRGIYP
MDEVYFIQGRIEEEKGHFEKALEFYEESYKQPISQAGLRDKLAWLKSWNYYKLQRFDEAA
ASLQQMRDTIKDPSDKMRAKFWLGRALKNSNKTAESTTELESLIKEDPLGYYGMMAYREL
NREYPAIKGNAQDSASASILGLDELQGRLRLQIEWLIAVNEKPFAEKALNQASDDLKKAG
ITSEKTWLTMFSAYARAGLYMPLFSTLGTLQPEVKDRLLNDHPDLLFPQPYRDIVAGASE
KSGIPQEFIYAIIRQESAFNPEARSPVDAFGLMQLLPSVSKNLAATYKLEYKEALDLYKP
EINIPLGAFELKTLMKKYNNQYILAVSGYNANDSAIRGWLKTRYRDDAVEFIEEVPYEET
RAYIKLTMRNYVFYDRLLHSQSAVKFPEDLLRLKK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttatttattgccctctcatttctttcagttcttatgggttgcgcgaccacc
tcgcgccaagacactcgctttgaaaaaagattgataccgcaagacaacccggaatgggtt
cgtctgtatcttgaggctgcagaaaagaaaacatctgcgccgaagcttgcctgcgcaaat
tataaagagctttcaaatcaccaggattttccgatcaaagatttggctttgcttcgtgcc
tatgaatcctgcccggctgatgaaaaactaaatacgcttccggagagtatcaatccttgg
tatgcggatttatttgccgacatcagacttaaagaatctttagagacatcggatttgaaa
gatgatctgcatgcctacctggcaaaggctggcgttgaaaacaacaaaaagaaaaaagaa
gattaccttcaaaaggctttggccgccgccaaaaaaatcgattcacaagaatacgtggta
gaggttcaagcccagctatacaaaatttctcctcgtctaaatcccacgccgcccttcaaa
gaactcagtgccgtggccatggatttccgattcaatcgcgatttcgacgaagctcttgga
gtctataaaaagattctgtcttccaaagaagcatcaactgacgacaaattccaggcgacc
aaaaacgtccgcatgacttacaaggttgcgcaacgtcgccaggattacatcaacgcgacg
tctgagcttgtgaacacgacgaaaaaacaatatcgcgagaataaaaaagatcgcaaagct
ttggcccgctatcacgatgccctggtcctgcttgcccgaacactatggactgaagatcaa
acatcaatggcggtaaaaaccctgaccgaagccaaccgtcagcttcgcggcatttatcca
atggatgaagtgtactttatccaaggacgcatcgaggaagaaaaaggccatttcgaaaag
gctttggaattctatgaagaaagttataagcagccgatcagccaagccggacttcgtgac
aaattggcgtggttgaaatcctggaactactacaaactgcaacgctttgatgaagcagca
gcaagcctgcaacaaatgcgcgacaccattaaagatccttccgataaaatgcgcgcgaag
ttttggctgggccgtgctttaaaaaattcgaataaaaccgctgaatccacgaccgaactt
gaaagccttattaaagaagatccattgggttattacggaatgatggcttaccgcgaactc
aaccgcgaatatccagccatcaaaggcaatgcacaagactctgccagtgcaagtattttg
ggattggatgaactgcaagggcgccttcgcctgcaaattgaatggttgattgctgttaac
gaaaagccctttgccgaaaaagcgttgaaccaagcttctgacgatctcaagaaagctggt
attacttccgaaaaaacgtggctgacgatgttttcagcttatgctcgcgcagggctttac
atgccgttgttctctacccttggaacactgcaaccggaagtaaaggatcgcttgctaaat
gaccatcccgatcttttattccctcaaccctatcgcgacatcgttgctggtgcttctgaa
aagagtggaattccacaggagttcatctatgcgatcattcgacaggaatctgcatttaac
cctgaggcgcgcagccctgttgacgcctttggattgatgcagctgctaccgagtgtgtcg
aagaacctcgccgcaacttacaaattggaatataaagaagctttggacctttataagcct
gagatcaatattccactcggcgcatttgaacttaagactttgatgaagaagtacaacaat
caatatatccttgcggtttccggctataacgccaatgactccgccatacgcggttggtta
aaaactcgatatcgtgatgatgctgtcgagtttattgaagaggttccttatgaagaaact
cgagcatacatcaagctaaccatgagaaactatgtgttctatgatcgcttgcttcacagt
caatctgcagtgaagtttcctgaagatcttttaaggctaaaaaagtaa
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