Bdellovibrio sp. KM01: HW988_14330
Help
Entry
HW988_14330 CDS
T08445
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW988_14330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdk03019
]
HW988_14330
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_14330
Enzymes [BR:
bdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW988_14330
Messenger RNA biogenesis [BR:
bdk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HW988_14330
DNA repair and recombination proteins [BR:
bdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HW988_14330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QLY24619
LinkDB
All DBs
Position
complement(2957842..2959287)
Genome browser
AA seq
481 aa
AA seq
DB search
MMDLHDLLIRNFEFSTFRGEQEAILGRVWQGENLLALMPTGMGKSLCFQFPAKIREGLVI
VISPLIALMQDQVFKAKDLGISATCLNSALTRDERESRQERLAKGDYKLLYVTPERFRKP
EFLKAIEGRKIQLLAVDEAHCISQWGHDFRPDYSRVGEFRALLGNPPTLALTATATPEVQ
KDILTKLNIPDAEIISAGIERPNLALRVHDLYGMDDKIRAIVGLRYQQPGSGIVYCSLIQ
TLRKISAELNRAGVQHLVYHGDLSPQDRKRNQKAFINEEAPLMLATPAFGLGIDKPNVRL
LVHAEIPSALESYFQEVGRAGRDGQESFCHLLYDQDDVSIQMEFLKWSHPEPEFIAKIYD
LIEQNRLRVNQEKFDFLREQMNFRNRRDFRPEAAVSILERWGCLQKSDDPFPYLCVQAPT
AEQFAAENGPVILKAQNSKLLEMVRWATQDKECRMNYIYHYFGHKHETPCGKCDICVDNQ
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatggacctccacgatctcctgattaggaacttcgaatttagcacttttcgcggcgaa
caagaagcgattttaggccgagtatggcaaggcgaaaacctcctcgcgttaatgcccacg
ggcatgggaaaatccctttgttttcagttccctgcgaaaatccgagaaggcctagtaatc
gtcatttctccgttgatcgctttgatgcaggatcaagtgtttaaggccaaagaccttggg
atttcggccacttgcctaaactccgctttaacgcgagatgagcgggaaagccgccaggag
cgtttggcgaagggcgactataaacttctgtatgtgacgcccgagcgttttcgcaaacct
gagtttttaaaagccatcgaaggccgtaaaatccaacttttagcggtggacgaagcccat
tgtatttcgcagtggggtcatgatttccgtcccgattactccagagtgggggagtttagg
gcattacttggaaatcctccgacattggcgttgacggcaacggcgacaccggaagtgcaa
aaagatattctgacgaaattaaatattcctgacgccgaaattatttcggcaggaattgaa
aggcctaacctggctttgcgagttcacgatttatacggcatggatgataaaatccgggcg
atcgtgggacttcgttatcaacaaccgggttcaggcatagtttactgctcgctgattcaa
acgttgcgtaaaatttcagcagagctaaatcgcgccggagttcagcatctggtttaccac
ggtgatctttcgccccaggatcgcaagcgtaatcaaaaagcctttatcaatgaagaagca
cctttgatgttggcaacacccgcatttggattgggtattgataaacccaacgtgcgcctg
ctggtgcatgcggaaattcccagtgcgctcgaaagttattttcaggaagtcggtcgcgcg
ggtcgagatgggcaggaatctttctgtcatcttttgtacgatcaggatgacgtcagcatt
caaatggaatttttgaagtggtcacatcctgagccagaattcattgctaaaatttatgat
ctgatcgagcagaatcgcctgcgagtaaatcaggaaaaatttgattttttaagagagcaa
atgaatttccgcaaccgccgggatttccgtcccgaagccgccgtcagtattttggagcgt
tgggggtgtttgcaaaaatccgatgatccatttccatatctgtgtgtccaagcgccgaca
gccgagcaatttgcagctgaaaatggaccggtgattttgaaagcacaaaattcaaaattg
ttagaaatggttcgttgggccactcaagataaggagtgtcggatgaattatatctatcat
tacttcggtcataaacacgaaactccctgcggtaagtgcgacatctgtgtagataatcaa
aaatag
DBGET
integrated database retrieval system
