KEGG   Bdellovibrio sp. KM01: HW988_15515
Entry
HW988_15515       CDS       T08445                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bdk  Bdellovibrio sp. KM01
Pathway
bdk00010  Glycolysis / Gluconeogenesis
bdk00020  Citrate cycle (TCA cycle)
bdk00260  Glycine, serine and threonine metabolism
bdk00280  Valine, leucine and isoleucine degradation
bdk00310  Lysine degradation
bdk00380  Tryptophan metabolism
bdk00620  Pyruvate metabolism
bdk00630  Glyoxylate and dicarboxylate metabolism
bdk00640  Propanoate metabolism
bdk00670  One carbon pool by folate
bdk00785  Lipoic acid metabolism
bdk01100  Metabolic pathways
bdk01110  Biosynthesis of secondary metabolites
bdk01120  Microbial metabolism in diverse environments
bdk01200  Carbon metabolism
bdk01210  2-Oxocarboxylic acid metabolism
bdk01240  Biosynthesis of cofactors
Module
bdk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bdk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bdk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bdk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bdk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HW988_15515 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HW988_15515 (lpdA)
   00620 Pyruvate metabolism
    HW988_15515 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HW988_15515 (lpdA)
   00640 Propanoate metabolism
    HW988_15515 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HW988_15515 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HW988_15515 (lpdA)
   00310 Lysine degradation
    HW988_15515 (lpdA)
   00380 Tryptophan metabolism
    HW988_15515 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HW988_15515 (lpdA)
   00670 One carbon pool by folate
    HW988_15515 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdk04147]
    HW988_15515 (lpdA)
Enzymes [BR:bdk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HW988_15515 (lpdA)
Exosome [BR:bdk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HW988_15515 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like NAD_binding_8 GIDA DAO FAD_binding_2 FAD_binding_3 Lys_Orn_oxgnase Thi4 AlaDh_PNT_C Lycopene_cycl UDPG_MGDP_dh_N XdhC_C 3HCDH_N TrkA_N
Other DBs
NCBI-ProteinID: QLY24824
LinkDB
Position
3224244..3225665
AA seq 473 aa
MQNFDVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLH
KAQHNFKDMGLMIKGDINVDMKQLVKWKQSVSDKMSSGVGQLLKGYGVTHIKGDAEFKSS
KEISVKSSAGTEAIQAKYFIVATGSRPIEIPGFKFDEKDICSSTGALAFDEIPKRVAVIG
GGYIGLEISSYLRKLGTEVTVIEAMPSLLAGVVDPDCANIVVRKLDKAGVKIMYGAKAKS
QKKAKDGYEVTVEINGKEEVVKCDKILVTVGRRPNGDQANLKAAGIAVDERGFVKVDAQR
RTNVQNIFAIGDICGQPMLAHKASHEGVLVAEVISGANRVYDAKTVPAVVFTDPEIASAG
MTEAEAKAKGHTELKIGKFPFGANGRAVSMMETEGFVKMIADAKTHVLLGVHIVGPEASN
LISEAVLAIEMGARIEDLALSIHPHPTLGETIMECAEATLGHAIHIIQKPLKK
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaaaattttgacgtagtagtaattggtgcgggtcccggtggttatgttgccgctatc
cgctctgcgcaacttggttttaaaacagcagttatcgaacgtgagttcttgggtggcgtg
tgcttgaacgtgggttgtatcccatctaaagccatgatcacggcgactcaccttttgcac
aaagctcagcataacttcaaagatatgggcttgatgatcaaaggcgatatcaatgttgat
atgaaacaacttgtgaagtggaaacaatccgtttcagacaaaatgtcgagcggtgttggt
caacttcttaaaggttacggcgtaactcacattaaaggcgacgctgaattcaaatcttct
aaagaaatctctgttaagtcatctgcaggcactgaagctatccaagctaagtacttcatc
gtggctacaggttctcgtccaattgaaatccctggtttcaaattcgacgaaaaagacatc
tgttcttcaacgggcgctttggcattcgacgaaattccaaaacgcgtggcagttatcggt
ggtggctacatcggtcttgagatctcttcatacctacgcaaactaggaactgaagtgact
gtgatcgaagcaatgccatcattgcttgctggtgttgttgatccagactgtgcgaacatc
gttgtacgtaagcttgataaagcgggcgtaaaaatcatgtacggtgcaaaagctaaatct
cagaaaaaagctaaagacggttacgaagtgactgttgaaatcaacggtaaagaagaagtt
gttaaatgcgataagatcctagtcactgttggacgtcgtccgaacggtgaccaagcgaac
ttgaaagctgcgggtatcgcagttgacgagcgtggctttgttaaagtggatgctcaacgc
agaacaaacgttcaaaacatctttgctatcggtgatatctgtggtcagccaatgctggct
cacaaagcttcacacgaaggtgtgttggttgctgaagtgatctctggcgcgaaccgcgtt
tacgacgcgaaaacagttccagcagttgtctttacagatccagaaatcgcatctgcaggt
atgactgaagctgaagcaaaagccaaaggtcacacggagcttaaaatcggcaaattccca
tttggtgccaacggccgcgctgtcagcatgatggaaaccgaaggcttcgtaaaaatgatc
gctgatgcaaaaacgcatgtacttctaggtgttcacatcgtgggccctgaagcttcgaac
ttgatctctgaagcagttcttgcgatcgagatgggcgcacgcattgaagacttggctctt
tcaatccaccctcacccaacattgggcgagacgatcatggaatgtgctgaggcaacattg
ggtcacgcaatccacatcatccaaaagcctctgaagaaatag

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