Bdellovibrio sp. KM01: HW988_15840
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Entry
HW988_15840 CDS
T08445
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00260
Glycine, serine and threonine metabolism
bdk00630
Glyoxylate and dicarboxylate metabolism
bdk00670
One carbon pool by folate
bdk00785
Lipoic acid metabolism
bdk01100
Metabolic pathways
bdk01110
Biosynthesis of secondary metabolites
bdk01200
Carbon metabolism
Module
bdk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HW988_15840 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HW988_15840 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HW988_15840 (gcvP)
00670 One carbon pool by folate
HW988_15840 (gcvP)
Enzymes [BR:
bdk01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HW988_15840 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QLY24882
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Position
3302440..3305310
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AA seq
956 aa
AA seq
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MKIENLSARNEFIPRHIGPSDSDIQAMLKELGFANLDELANKIIPSQIRTDHKFDGVGPG
ISEFGLLNHLKSMVSKNKVMKSYIGLGFHDSITPTIIQRNIFENPVWYTAYTPYQAEIAQ
GRLEALLNFQTMVADLTGMEISNSSLLDEGTAAAEAMFMAHALCKTKANAFVVSDKMHPH
VIEVLGTRAEPLGLEMIVTNPATYDFAKPAFGVFFQYPDTEGAVENYSDLAKKYKDQGAH
VVASVDLLAMTLLTPPGEWGADIVVGNSQRFGVPLGYGGPHAAFLATKDAYKRMMPGRLV
GVSVDSQGKQALRLALQTREQHIRREKATSNICTAQVLLANMASMYAVYHGPQGLKKIAQ
RVNRLTAIMADGLSKLGYNVSKGAFFDTITVISDNAAGILAEAEKLGMNFRKINDKTLGI
SLDETVTLTDVETVWMAFNGGNKAAFDCHSIDDTLKLEIPAALARKSAFMTNPVFNSHHS
ETELLRYIHHLQNKDITLTHSMIPLGSCTMKLNATTELVPVSWPEISKLHPFAPVSQTSG
LIEMIKDLEAKLCDITGFAAVSLQPNAGSQGEYAGLLVIRKYHQSRGQGHRNICLIPSSA
HGTNPASAALAGMQVVVVNCDDLGNVEISDLKAKAEQHKDNLSALMITYPSTHGVYEEGI
KEICDIVHANGGQVYMDGANMNALVGMCRPGTFGADVSHMNLHKTFAIPHGGGGPGVGPI
GVGAHLKEFLPKHSLVPEAGPANGITSTTSAPWGSASILPISWAYITMMGAEGLRKATLV
SILSANYIAKKLEKAYPVLYKGKSGYVAHECIIDVRDIKKTSGIDVTDVAKRLIDYGFHA
PTMSFPVAGTLMIEPTESEPKQEVDRFIDAMLAIRGEIAAVESGKMDKENNALKNSPHTA
QMMMKPEWNHPYSREEAVYPVEWLRTNKFWPVVGRVDNAYGDRNLICSCPSIEEYR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgaaaatttatctgctagaaatgaatttattccccgccacattggtccaagc
gactctgacatccaagcgatgttgaaagagttgggtttcgccaatttggacgagctggcc
aacaaaattattccttctcagatccgcacggatcataaattcgacggcgtaggccccggt
atttccgaattcggtttgttgaatcatttgaaatcaatggtttccaaaaacaaagtgatg
aaatcctatatcggtttgggtttccacgattccatcactccaacgatcattcaaagaaat
atctttgaaaatccagtgtggtacacagcatacactccttaccaagcagagatcgcacaa
ggtcgcttggaagcacttttgaacttccaaacaatggttgctgatttaacgggtatggaa
atttccaactcctcacttcttgatgaaggaacagctgctgctgaagcgatgttcatggct
cacgcactttgcaaaactaaagcaaatgcgtttgtggtttcagataaaatgcatcctcac
gtaatcgaagtcctgggtactcgtgcagaaccattgggcttagagatgattgtgacgaat
ccagcgacttacgatttcgcaaaaccagcgttcggtgtgttcttccaataccctgacact
gaaggtgctgtagaaaactattctgatcttgcaaaaaaatataaagaccaaggcgcacac
gttgtagcttcagttgatttgttggcaatgactcttctgactcctccgggagagtggggt
gctgatatcgttgtgggtaactctcaacgtttcggcgtgccattgggttacggcggtcct
cacgctgccttccttgcaacgaaagatgcttacaagcgcatgatgccaggtcgtttggtt
ggcgtgtctgtggactctcaaggcaaacaagcattacgtctggctttgcaaactcgcgag
caacatatccgtcgtgaaaaagcgacttcgaatatctgtactgctcaagtgctattggca
aacatggcttcgatgtacgcagtttaccacggaccacaaggtcttaagaaaatcgctcaa
cgcgtgaatcgcctgacagcgatcatggctgatggtctttcgaaacttggttacaatgtt
tccaaaggtgcgttctttgatacgattactgttatctctgacaacgctgcaggaattttg
gctgaggcagaaaaactgggcatgaacttccgcaaaatcaacgacaagactttgggcatc
tctttggatgagacagtgactttgactgacgttgaaacagtttggatggccttcaacggt
ggcaacaaagcggccttcgattgtcactctatcgacgatactttgaaattggaaatccca
gcggctttggctcgtaaatcggcattcatgacaaacccggtgttcaactcgcatcacagc
gagacagaacttcttcgttacatccaccacttgcaaaacaaagacatcactttgactcac
tcgatgattccattgggttcttgcacaatgaaattgaatgcgacgactgaattggttccg
gtttcatggccagagatcagcaaacttcacccgtttgctccggtttctcaaacttctggt
ttgattgaaatgatcaaagaccttgaagcgaaactttgcgacatcacgggttttgcagct
gtgagcttgcaacccaatgcgggttcccaaggtgaatacgcgggtcttttggtgattcgt
aagtaccaccaatcccgtggtcaaggtcacagaaacatctgcttgatcccttcttctgcg
cacggaacaaaccctgcctctgcagctttggctggcatgcaagtggttgttgtgaactgc
gatgacttgggtaacgttgaaatttctgatctaaaagcaaaagctgaacaacacaaagac
aatttgtctgcgttgatgatcacttatccatccactcacggtgtttacgaagaaggtatc
aaagaaatctgcgatatcgttcacgcaaacggcggtcaagtgtacatggacggagcgaac
atgaacgccttggtcggcatgtgccgtccaggtacttttggtgctgacgtttctcacatg
aaccttcacaaaacattcgcgatccctcacggtggtggcggtcctggtgtgggtccaatc
ggtgtgggcgctcacttgaaagaattcttgcctaagcactctttggttccagaagctggt
cctgcaaacggtatcacgtcaacgacatcggctccatggggttcggcttcgatccttccg
atctcttgggcgtacatcactatgatgggtgccgagggtcttcgtaaggcgactttggtt
tcgattttgtcagcgaactacatcgctaagaaattagaaaaagcttatccagttctttac
aaaggtaagtctggatatgtggcgcatgaatgtatcatcgacgttcgcgatatcaagaaa
acatctggtatcgacgtgacggacgttgcaaaacgtctaatcgattacggcttccatgcc
ccgacgatgtcattccctgttgcaggaacattgatgatcgagccaactgaatccgagcca
aaacaagaagtggatcgcttcatcgatgcgatgcttgcgatccgtggcgaaatcgccgcg
gttgagtctggcaaaatggacaaagaaaacaacgcacttaaaaactctccgcacacagcg
cagatgatgatgaaacctgaatggaatcatccttactcacgcgaagaggcggtttacccg
gttgagtggttgcgcacgaacaagttctggcccgtagtaggacgcgtagacaacgcctac
ggcgaccgcaacttgatctgctcatgtccatccatcgaagaataccgctaa
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