Bdellovibrio sp. KM01: HW988_17260
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Entry
HW988_17260 CDS
T08445
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk00541
Biosynthesis of various nucleotide sugars
bdk01100
Metabolic pathways
bdk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HW988_17260 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bdk01005
]
HW988_17260 (rfaD)
Enzymes [BR:
bdk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HW988_17260 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bdk01005
]
Core region
HW988_17260 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QLY25143
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Position
3595806..3596774
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AA seq
322 aa
AA seq
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MIIVTGANGFIGSVMVWQLNEKGFSDIIAVDTVDLQKRNLLRKRVYSKFLKKDDLWSFLE
TDEAKKKVTWIIHMGACSSTTETNKDFLWENNTNYTQRIFEWCTKNQKSMIYASSAATYG
AGELGFDDTTDPEKLKPLNLYGESKVLFDRWALKQTQTPAHWYGLKFFNVFGPNEYEKEG
MASIVFKAHNQIKETGVLGLFKSANPEYKDGEFMRDFVYVKDVTGWMAELMEKKPTSGIY
NMGFGKPRTWLDLAKATFTAMGKEMKINWIEMPENIRGQYQYYTEAKTDKWNQAGMSAPK
WPLEKAVDDYIKNYLSQEDPLL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggtgcaaacggatttattggcagcgtgatggtatggcaactcaac
gaaaaagggttctccgatatcatcgccgtggatacggtcgatcttcaaaaacgcaacctt
cttcgtaagcgcgtttacagtaaatttcttaagaaggacgatctttggtctttccttgaa
accgacgaagccaaaaagaaagtcacttggatcatccacatgggagcttgttcttccaca
acggaaaccaacaaagacttcctttgggaaaataacacgaactacacgcaacgcattttc
gaatggtgtacgaaaaaccaaaaaagcatgatctatgcttccagcgctgccacttatggt
gccggcgagttgggttttgacgacacgacggatcctgaaaaattaaaaccattgaacctg
tatggagagtccaaagtgttgtttgaccgttgggctctgaagcagacgcaaactccggcc
cactggtacggtcttaaattctttaacgtcttcggtccgaacgaatacgaaaaagaaggc
atggcgagcatcgttttcaaagcgcacaaccaaatcaaagaaactggtgttctgggacta
tttaaatctgctaaccctgaatacaaagatggcgaattcatgcgtgacttcgtttacgtc
aaggacgtaacgggctggatggctgagttgatggagaaaaaaccaacaagcggcatctac
aacatgggcttcggcaagcctcgtacctggttggatttggcaaaagccaccttcacagcg
atgggtaaagagatgaaaataaactggatcgagatgccagaaaatatccgtggacagtat
cagtactacactgaagccaaaacggataaatggaaccaagctggaatgagcgctccgaaa
tggcctctggaaaaagctgtagatgattacattaagaattatctaagccaagaagacccc
ttgttataa
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