Bdellovibrio sp. KM01: HW988_17755
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Entry
HW988_17755 CDS
T08445
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HW988_17755 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdk03400
]
HW988_17755 (xth)
Enzymes [BR:
bdk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HW988_17755 (xth)
DNA repair and recombination proteins [BR:
bdk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HW988_17755 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QLY25236
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All DBs
Position
3686174..3686947
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AA seq
257 aa
AA seq
DB search
MKLISWNVNGLRSVHKKNFREWFEKEKADVVCLQEIKITDEAIKKDETFYHPAKYHSSWA
FAEKPGYSGLAIYSKNEPDDVRIGLGIPKFDSEGRWIEADFGPITVVNSYFPNSQREHTR
LPFKLEFCAAAEKRLQALRKKGREVLICGDFNIAHKEIDLRNPKTNMKNAGFLPEERAWM
TKFLDKLEWVDAFRKFEQGPDHYTWWSYRPGVREKNIGWRLDYFLVNKEASDRLKAAAHC
PDVMGSDHCPVRLTLKK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatttcctggaacgtgaatggtcttcgttccgttcataaaaagaacttccgt
gaatggtttgaaaaagaaaaagcagacgtcgtctgcctgcaggaaattaaaatcaccgac
gaggcgattaaaaaggatgaaacattttatcatccggcaaaatatcactcttcctgggct
tttgcggaaaagccgggatactcgggtctggcaatctattcaaagaatgaacccgatgat
gtccgcatcggtttgggaatcccaaaatttgactctgaaggtcgttggatcgaggcggat
ttcggcccgattactgtggtgaacagctatttcccgaatagccaaagagaacacactcga
ttaccttttaaactggaattctgtgcagctgcagaaaagcgcctacaagctcttaggaag
aaaggccgcgaagtcctgatctgtggtgattttaatatcgctcacaaagaaattgatctt
cgtaatcccaaaaccaatatgaaaaatgcgggcttcctgccagaagagcgcgcgtggatg
acaaagttcctggataagcttgaatgggttgatgcttttagaaaatttgagcaaggcccg
gatcactacacatggtggagctatcgacctggagtgcgtgaaaagaacattggttggcgc
ttggattacttcctggtgaacaaagaagcgtcagacagattaaaggcagcagcccattgc
ccagatgttatgggttccgaccactgccctgttcgtctgactctgaaaaagtag
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