Bdellovibrio sp. KM01: HW988_18650
Help
Entry
HW988_18650 CDS
T08445
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdk03009
]
HW988_18650
Enzymes [BR:
bdk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HW988_18650
Ribosome biogenesis [BR:
bdk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HW988_18650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
TRM5-TYW2_MTfase
Methyltransf_25
RrnaAD
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_31
FtsJ
Methyltransf_32
TrkA_N
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QLY27523
LinkDB
All DBs
Position
3871915..3873021
Genome browser
AA seq
368 aa
AA seq
DB search
MAIGGAGIARHDGLVIFVPLAAPEDELLVEITTAKKNFAEARIVDILKPGPSRRTPPCPV
ADVCGGCNWQQITEDEQRNQKESLVLETIKKFNPELNFEYLPVQASPRSFRYRNRIQPKF
HNGRFGFFARNSHEIVEIDDCPITEEILTKKFAEVRQWAADKKSRDLLRLEMYIAENEEV
RYGLITDEDDGIGFSQVNRFQNPHLLETTLNWAGEIEYPQVFDLYAGSGNFTFPLMQKYK
SAKVTAVELNPKLVERGRGLNKDKRLRYFMSDVESYMRRADIQNQDLVVLDPPRAGASEY
IMRSLAAAAPQKIIYISCHPVSLARDLKWFFAWAQKLGKNFRLERMQTFEMFPQTDHVET
IAELRVDS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgggggcgcgggcattgcccgccacgatggccttgttatttttgtaccactc
gccgcgcctgaagacgaacttctcgtagaaatcacgacagccaagaaaaattttgctgaa
gctcgaatcgttgatattttaaaaccgggcccttcacgcagaactccaccatgtcccgta
gcggatgtttgcggtggttgcaactggcaacaaatcactgaagacgaacaacgaaatcaa
aaagaatctttggttcttgagacgattaagaaatttaatccagaattgaatttcgaatat
ctgccggtacaggccagtcctcgttcgttccgctatcgcaatcgtattcagcctaagttt
cacaatggtcgcttcggatttttcgcaagaaactcccatgaaatcgtggaaatcgatgat
tgcccgatcaccgaggaaattctgacgaaaaaatttgccgaagtcagacaatgggccgca
gataaaaaatctcgcgatctcttgcgcttagaaatgtacatcgctgaaaatgaagaagtc
cgttatggtctaatcactgatgaggatgatggtattggcttttctcaggtcaaccgtttc
caaaatccacatttgttagaaacgactttgaattgggccggagaaattgagtacccgcag
gtttttgacctttacgcgggctcgggcaatttcacctttccgttaatgcaaaagtataaa
tctgccaaagtgaccgcagtcgaacttaatcctaaattagtggaacgtggtcgaggttta
aataaagataagcgtcttcgctactttatgtcggatgtggaaagctacatgcgcagagcc
gatattcaaaatcaggacctggtggtcctggaccctccccgcgccggagccagcgaatat
atcatgcgatccttagctgcagcagctccgcaaaagatcatttacatcagttgccaccct
gtttccctggcgcgtgatctaaaatggttctttgcatgggcgcaaaagctcggcaaaaat
ttccgcctcgagcgaatgcaaacattcgagatgtttcctcagacagaccatgtagagact
attgctgagctcagggttgactcttag
DBGET
integrated database retrieval system
