Burkholderia dolosa: AK34_1027
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Entry
AK34_1027 CDS
T03793
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AK34_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdl03400
]
AK34_1027
Enzymes [BR:
bdl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AK34_1027
DNA repair and recombination proteins [BR:
bdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AK34_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJY14429
LinkDB
All DBs
Position
1:1102421..1103287
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AA seq
288 aa
AA seq
DB search
MATARKAPVRRATAVAVRPAARRAPAEKADVARGVPNGALNGHAKPARAKSADAVQTDAA
MPAADAVRKARESDATADGADAVVRPAYWDKACADLMKRDRILKKLIPKFGPAHLVKRGD
PFVTLARSVVGQQISAPSAQSLWARIEDACPKLAPQPVIRLGADKLIACGLSKRKTEYIL
DLAQHFVSGALHVDKWMSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVMPLDDPGL
IRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDASDAGA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccagaaaagcgccggtcaggcgtgcgaccgcggtcgccgtgcgtccggca
gccaggcgcgcgccggccgagaaggcggacgtcgcgcgcggcgtgccgaacggcgcgctc
aacggtcatgcgaagcccgcgcgcgcaaagagtgcggacgccgtgcagacggatgcggcg
atgccggccgcggacgcagtgcgcaaggcgcgcgagtccgatgcgacggccgacggcgcg
gacgccgtcgtgcgccccgcatactgggacaaggcgtgcgccgatctgatgaagcgcgat
cgcatcctgaagaagctgatcccgaagttcggtcctgcgcatctcgtgaagcgcggcgat
ccgttcgtcacgctcgcacgctcggtcgtcggtcagcagatctcggcgccgtccgcgcag
tcgctgtgggcgcgcatcgaggacgcgtgtccgaagctcgcgccgcagccggtcattcgg
ctcggcgcggacaagctgatcgcatgcgggctgtcgaagcgcaagaccgaatacattctc
gacctcgcgcagcatttcgtatcgggcgcgctgcacgtcgacaaatggatgtcgatggac
gacgaggacgtgatcgcggaactcacgcagattcgcggcatcagccgctggacggccgag
atgttcctgatcttcaacctgtcgcgaccggacgtgatgccgctcgacgatccgggcctg
atccgcgcgatcagcgtcaattacttcagcggggaacccgtcacgcgcagcgaggcgcgc
gaggtggccgccaactgggaaccgtggcgcaccgtcgcgacctggtacatgtggcgcagc
ctcgacgcgtccgacgccggcgcgtga
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