Burkholderia dolosa: AK34_1140
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Entry
AK34_1140 CDS
T03793
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bdl
Burkholderia dolosa
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdl03016
]
AK34_1140
Enzymes [BR:
bdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AK34_1140
Transfer RNA biogenesis [BR:
bdl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AK34_1140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJY11860
LinkDB
All DBs
Position
1:1229307..1229894
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AA seq
195 aa
AA seq
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MTQLTLPGIEAPRLNHRLFFAVQPDPQTAKRIADTARRASPDAPVDDRWVDTTRLHVTLR
TLGDFMHVPPDVVVRARDAARRVHARPFDVTFDRIVSFKGRPDNYPWVLTASDDPRELID
LRQQLVEALKRTGLRVPGALSALHVTLRYDERRRAPRTVEPMTWTVSEFVLIDSWLGRTH
HDVIGRWPLNADAPA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaactgactttgccagggatcgaagcgccgcggttgaatcatcggctgtttttc
gcggtgcagcccgatccgcagaccgccaagcggattgccgacacggcgcgccgcgcttcg
ccggacgcgccggtcgacgaccgctgggtcgatacgacgcgcctgcatgtgacgctgcgt
acgctcggtgatttcatgcacgtgccgccggacgtggtcgtccgcgcccgcgatgcggca
cggcgtgtccacgcgcggccgttcgacgtgacgttcgatcggatcgtcagtttcaagggt
cgtcccgacaactatccgtgggtgctgactgcgtccgacgatccgcgcgagctgatcgat
ttgcggcagcaactcgtcgaagcgctgaaaaggaccggccttcgagtgccgggcgcgctt
tcggcgctgcacgtcacgctacggtacgacgagcgccgccgcgcgccgcgcacggtcgaa
ccgatgacatggacggtgagcgagttcgtgctgatcgacagctggctcggcaggacacac
cacgacgtaatcggtcgctggccgttgaacgccgacgcgccggcctga
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