Burkholderia dolosa: AK34_1949
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Entry
AK34_1949 CDS
T03793
Name
(GenBank) iclR helix-turn-helix domain protein
KO
K20329
IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
bdl
Burkholderia dolosa
Pathway
bdl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK34_1949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdl03000
]
AK34_1949
Transcription factors [BR:
bdl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AK34_1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR
MarR_2
HTH_24
MarR
HTH_36
Rrf2
HTH_Crp_2
HTH_20
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJY14260
LinkDB
All DBs
Position
1:2104099..2104923
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AA seq
274 aa
AA seq
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MSTPVTPPAPRDRETSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRVLLDALRATA
GDDWPHVSARLTPALDEAMRDGHAIALGEWREGLNAVAAGFVGPSGQRYSVNCGGASHQC
PPEWLREHVVPALQECIAKITREIGGAPARRVAV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgactcctgtaacccctcccgcgccgcgggaccgcgaaacgtcccctgacgagatc
accgcgctcgcgcgcgggctcgccgtgctgcggcgcatcgcggccgccgatgcgcccgtc
agcaaccgcgaactgaccgaattgaccggcatcccgaagccgaccgtgtcgcgcatcacc
gcgacgctcgtcagcgccggcttcctgttccagttgcccgacagcgagcgcttcgtgctc
accgcgtcggtgctcgagctgagccacggcttcctgcgcaacttcgacatccgcgcgcgc
tcgcggccgttcatgatcgaactcgccgaacgcacgtcgctgtcggtgcatctggcggtg
cgcgaccgtctcgacatggtcgcgatcgacgtgatccggccgcgctcggccgtgctcgtc
acgcgcctcgagatcggctcgcggatggacatcgcacgcacggccgtcggccgcgcgtat
ctcgccgcgctcgaagacgacgagcgccgcgtgctgctcgacgcgctgcgcgcgacggcc
ggcgacgactggccgcacgtgtccgcgcggctcacgcccgcgctcgacgaagcgatgcgc
gacggccatgcgattgcgctcggcgaatggcgcgaaggactcaatgcggtcgcggccggc
ttcgtcggcccgtccggccagcgctattcggtgaactgcggcggcgcatcgcaccagtgc
ccgcccgaatggctgcgcgagcacgtggtgcctgcgctgcaggaatgcatcgcgaagatc
acgcgcgagatcggcggcgcaccggcgcggcgcgtcgccgtgtaa
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