Burkholderia dolosa: AK34_2101
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Entry
AK34_2101 CDS
T03793
Name
(GenBank) cobD/Cbib family protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl00860
Porphyrin metabolism
bdl01100
Metabolic pathways
bdl01240
Biosynthesis of cofactors
Module
bdl_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AK34_2101
Enzymes [BR:
bdl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
AK34_2101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
AJY12072
LinkDB
All DBs
Position
1:complement(2265919..2266857)
Genome browser
AA seq
312 aa
AA seq
DB search
MTFFSVLLALIIEQVRALSPSNPVFALFQFHAETVAHGLDAGKQKHGILAWLAVVLPWVL
IVALIYFLLYKVSFVLAFLWNVAVVYFTLGFRQFSHYFTDIHLALNNDDVPRAREILHEW
TGLDTVDMPVGEIVRHTLIHAVVASHRHVFGVFFWYVLPIGPAGAVLYRISEYLARSWST
PADDRTAAFSTFAQRAFFVIDWIPTRLTALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVL
LAAGSGALGARLAGPLAEPSSLDALAVGDSGPLTVGDDCTPRTLQSAVGLVWRAVILWMI
LLLMLTLAVWVS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgactttcttttcggttcttctcgccctcatcatcgaacaggtccgcgcgttgtcgccg
agcaatccggtatttgcgctgttccagtttcacgcggaaaccgtcgcgcatggtctcgac
gccggcaagcagaagcacggcatcctcgcgtggctcgcagtcgtgttgccgtgggtgctg
atcgtcgcgctgatctatttcctgctgtacaaggtgagcttcgtgctcgcgttcctgtgg
aacgtcgccgtcgtctacttcacgctcggctttcgccagttcagccattacttcaccgac
atccatctcgcgctcaacaacgacgacgtgccgcgcgcgcgtgaaatcctgcatgaatgg
accgggctcgacaccgtcgacatgccggtcggcgagatcgttcggcatacgctgattcat
gcagtcgtcgcgtcgcatcgtcacgtgttcggcgtgttcttctggtacgtgctgccgatc
ggtccggccggcgccgtgctgtaccggatctccgaatatctggcgcgcagctggtcgacg
ccggccgacgaccgcacggccgcattctcgacgttcgcgcagcgcgcgttcttcgtgatc
gactggattccgacgcggctcaccgcgctcggcttcgcgatcgtcggtaacttcgaggat
gcgatctacgcgtggcgcaatcacacgcgccaatggccggacccgaacgacggcgtgctg
ctcgcggcgggtagcggcgcgctcggtgcgcggctggccgggccgctcgcggagccgtcg
agcctcgacgcgctggcggtcggcgacagcgggccgctgacggtcggggacgactgcacg
ccgcgcacgcttcagtcggcagtcggcctcgtatggcgagcggtgatcctgtggatgatc
ctgctgctgatgctgacattggccgtgtgggtgtcgtga
Burkholderia dolosa: AK34_631
Help
Entry
AK34_631 CDS
T03793
Name
(GenBank) threonine-phosphate decarboxylase
KO
K02225
cobalamin biosynthesis protein CobC
Organism
bdl
Burkholderia dolosa
Pathway
bdl00860
Porphyrin metabolism
bdl01100
Metabolic pathways
bdl01240
Biosynthesis of cofactors
Module
bdl_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AK34_631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DUF5768
Motif
Other DBs
NCBI-ProteinID:
AJY12114
LinkDB
All DBs
Position
1:complement(681386..682405)
Genome browser
AA seq
339 aa
AA seq
DB search
MSDARIPHGGNLHEAARRHGIPYDAWLDLSTGINPVGYPVPPVPADAWRRLPDDDDGLAA
CAAGYYAAPDAAHVLPVAGSQAAIRALPALLPAGDAGVATLAYGEYAPAFTRHGHRVVPL
DIHADTLPATLRHVIVGNPNNPTADRVPTERLLGWHAQLSARGGTLIVDEAFADTGAVPS
LAPHVQRAGLVVLRSVGKFFGLAGIRAGFVLACPERIAALRDLLGAWTVGGPARHAVAAA
FADRAWQAATRERLAADGERLAALLRMHGFAVRATPLFSWTDDPRAAALHAALATRGIWT
RYFARPSSLRVGLPGNEAEWRRVADALAQCVPTLQREPA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcacgcataccgcacggcggcaacctgcacgaagccgcgcgtcgccacggc
attccgtacgacgcgtggctcgacctgtcgaccggcatcaatccggtcggctatccggtc
ccgccggtcccggccgatgcgtggcgccggctgcccgacgacgacgacggtctcgccgcg
tgcgcggccggctactacgcggcgcccgacgccgcgcacgtgctgccggtggccggcagt
caggccgcgatccgcgcattgccggcgctgctgccggccggcgacgcgggcgtcgcgacg
ctcgcatacggcgaatacgcgcccgcgttcacgcgtcacggccatcgcgtcgtaccgctc
gacatccacgccgacacgctgcccgcgacgctgcgccacgtgatcgtcgggaacccgaac
aatccgaccgccgatcgtgtgcccaccgagcgtctgctcggctggcatgcgcagctgtcg
gcacgcggcggcacgctgatcgtcgacgaggcgttcgccgacaccggcgccgtgccgtcg
ctcgctccgcacgttcagcgcgcggggctcgtcgtgctgcgctcggtcggcaagttcttc
gggctcgccggcattcgcgccggcttcgtgctcgcgtgtccggaacggatcgccgcgctg
cgcgacctgctcggcgcatggacggtcggcggaccggcgcggcacgccgtcgctgccgcg
ttcgcggaccgcgcatggcaggccgccacgcgcgaacggctcgcggccgacggtgaacgg
ctcgccgcgctgctgcgcatgcacggcttcgcggttcgcgcgacgccgctgttcagctgg
accgacgatccgcgcgccgccgcgttgcacgcggcgctcgcgacacgcggcatctggacg
cggtacttcgcacgaccgtcgagccttcgcgtcggcctgccgggcaacgaagccgagtgg
cgacgcgtcgccgatgcgctcgcgcaatgcgtgccgacgctgcagcgggagccggcatga
Burkholderia dolosa: AK34_632
Help
Entry
AK34_632 CDS
T03793
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl00860
Porphyrin metabolism
bdl01100
Metabolic pathways
bdl01240
Biosynthesis of cofactors
Module
bdl_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AK34_632 (cobD)
Enzymes [BR:
bdl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
AK34_632 (cobD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
AJY14524
LinkDB
All DBs
Position
1:complement(682398..683336)
Genome browser
AA seq
312 aa
AA seq
DB search
MLSLPVVAMLAVAAALVDRALGEPAGWHPLVAFGRLAARIELKLNTGRRGRAIGVAAWVA
AVVPPVAVAAWLAAVLPWPFAAALHVALLWFALGAKSLADHVAPIAAALLRRDLGAARTL
TARIVSRDTSDADEGALARAAVESALENGNDAIFGTLFWFVVAGGPGALLFRLANTLDAM
WGYRTPRFLTFGWAAARIDDALNWIPARVTAASYALLGDTASAWRCWRTQARHWDSPNAG
PVMAAGAGSLNVQLGGPAVYHGTLEDRPALGTGAVASAAHVVAALSLVMRTLALWLALLV
ASGALALATHHV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgctgcccgtcgtcgcgatgctcgcggtcgcggccgccctcgtcgatcgtgcg
ctcggcgagccggccggctggcatccgctcgtcgcgttcggtcggctcgccgcgcgtatc
gaactcaagctgaacacgggccggcgcggccgcgcgatcggcgtcgccgcgtgggtcgcg
gccgtcgtgccgccggtcgccgtcgccgcctggctggcagccgtgctgccgtggccgttc
gcggctgcgctgcacgtcgcgctgctgtggttcgcgctcggcgcgaagagtctcgccgat
catgtcgcgccgatcgccgccgcgctgctgcggcgcgacctcggcgccgcccgcacgctg
accgcgcggatcgtgtcgcgcgacacgagcgacgccgacgaaggcgcgctggcgcgcgcg
gccgtcgaatcggcgctcgagaacggcaacgatgcgatcttcggcacgctgttctggttc
gtcgtcgccggcggccccggcgcgctgctgtttcggctcgcgaacacgctcgacgcgatg
tggggctatcgcacgccgcgcttcctgaccttcggctgggccgcggcacgcatcgacgac
gcgctgaactggattcccgcgcgcgtcaccgccgcaagctacgcgctgctcggcgatacg
gcatcggcatggcgctgctggcgcacgcaggcgcgccactgggacagcccgaacgccggc
ccggtgatggcggccggcgcgggcagcctgaacgtgcagctcggcggtccggccgtctat
cacggcacactcgaggatcggcccgcgctcggcaccggcgccgtcgcgagcgccgcgcac
gtggtcgccgcgctgtcgctcgtcatgcgcacgctcgcgctatggctcgcgctgctcgtc
gcgagcggcgcactcgctctcgctacccatcatgtctga
DBGET
integrated database retrieval system