Burkholderia dolosa: AK34_2170
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Entry
AK34_2170 CDS
T03793
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl03030
DNA replication
bdl03430
Mismatch repair
bdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK34_2170
03430 Mismatch repair
AK34_2170
03440 Homologous recombination
AK34_2170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdl03032
]
AK34_2170
03400 DNA repair and recombination proteins [BR:
bdl03400
]
AK34_2170
Enzymes [BR:
bdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK34_2170
DNA replication proteins [BR:
bdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK34_2170
DNA repair and recombination proteins [BR:
bdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK34_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF6344
Motif
Other DBs
NCBI-ProteinID:
AJY12821
LinkDB
All DBs
Position
1:complement(2340623..2341750)
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AA seq
375 aa
AA seq
DB search
MPDSSLSDPASEQPLVFVDLETTGGSSAEHRITEIGVVEVGPLGVSTWTTLVNPGQSIPP
FIQQLTGISDAMVRDAPSFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGYAFNP
DVLCTVRLSRALFPREARHGLDALIERHGLVPSARHRALADADLLWQFWRQLHEIVPLER
LRDQIARTTRRFRLAGDLTEAWLDTAPAGCGAYALFGENDEPLYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIARLRPSYNRRPAVDTVRAGGAPW
PFDGAVAFEASGERRVFHVIDGWRYLGAADSLDAAAQLAADRTDGAFEPFTHRLLQTHLA
RGLQLLPLVARPSAA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccagtctgtccgatcccgccagcgaacagccgctcgtcttcgtcgacctt
gaaaccaccggcggttcgtccgccgagcatcgcatcaccgaaatcggggtggtcgaagtc
ggcccgctcggtgtgtcgacgtggaccacactcgtcaatccagggcagtcgattccgccg
ttcattcagcaactgaccggtatttccgacgcgatggtccgcgacgcgccgtcgttcgcg
tcgcttgcgcccgcgctgttcgagcggctcgacggcaagctgttcgttgcgcacaacgcg
agcttcgatcgcgggtttttgcgggcggaattcgagcgcgccggctatgcgttcaatccc
gacgtgctatgtaccgtgcggctgtcgcgtgcgctattccctcgggaagcgcggcatggt
ctcgacgcgctgatcgagcggcatggcctcgttccctcagcgcggcaccgcgcgttggcg
gacgcggacctgctgtggcagttctggcggcaactgcacgagatcgttccgctcgagcgg
ctgcgtgaccaaatcgcgcgcacgacgcggcgcttccgtctggcgggcgatctgaccgaa
gcgtggctcgatacggcgccggccggctgcggcgcgtatgcgctgttcggcgagaacgac
gagccgctttacgtcggccgtagcgtgcgcgtgcggcagcggctgcgtgcgttgctgacc
ggcgagcggcgatcgtcgaaagaaatgcggcttgcgcagcaggtgcggcgcgtcgaatgg
cgggagaccggcaatgaactcggcgcgatgctggccgaagcacaatggatcgcccgcctg
cgtccgtcgtacaaccgccgtccggcggttgacaccgtgcgggcaggcggcgcgccgtgg
ccgttcgacggcgcggtcgcattcgaagccagcggcgagcgtcgcgtgtttcatgtgatc
gacgggtggcgctatctgggcgccgcagattcgctcgatgcagccgcgcaactcgccgcc
gatcgcacggacggcgcgttcgaaccctttacccaccgcttgctgcagactcatctcgcg
cgcggcctgcaactgcttccgctggtcgcgcgtccatcggcggcctga
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