Burkholderia dolosa: AK34_2452
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Entry
AK34_2452 CDS
T03793
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AK34_2452 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdl03016
]
AK34_2452 (trmU)
Enzymes [BR:
bdl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
AK34_2452 (trmU)
Transfer RNA biogenesis [BR:
bdl03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
AK34_2452 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
ThiI
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AJY12252
LinkDB
All DBs
Position
1:2630971..2632119
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AA seq
382 aa
AA seq
DB search
MSKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVA
DLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAET
IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA
QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKLVGEHIGLAFYTFGQR
KGIGLGGSKDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPAEG
HACGAKTRYRQADAACTFAGAGGERFSLAFDDAQWAVTPGQSAVLYDGDVCLGGGIIEFA
ATGQPGHAAIAQGRTAALAEAR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgccgtgtagtggtgggcatgtcgggcggcgtcgattcgtcggtgaccgca
tggctgctgaaggaacagggctacgacgtggtcggcctgttcatgaagaactgggaagac
gacgacgacggcgaatactgctcgacgcgccaggactggatcgacgtcgtgtcggtggcc
gatctgatcggcatcgacgtcgaagccgtgaacttcgcggccgaatacaaggaccgcgtg
ttcgcggaattcctgcgcgaatattcggccggccgcacgccgaacccggacgtgctgtgc
aatgccgagatcaagttcaaggcgttcctcgatcatgcgatgtcgctcggcgcggaaacg
atcgcgaccggtcactacgcgcgcgtgcgcgagcgcgacgggcgcttcgagctgctgaag
gcgttcgatcatacgaaagaccagtcgtacttcctgcaccggctgaaccaggcgcagctg
tcgaagacgatgttcccgctcggcgagatcccgaagacaaaggtgcgcgagatcgccgcg
cagatcgggctgccgaacgcgaagaagaaggattcgaccggcatctgcttcatcggcgag
cggccgttccgcgacttcctgaaccgttatctgccgacgaagcccggcccgatgaagacg
ccggacggcaagctcgtcggcgagcacatcggactcgcgttctatacgttcggccagcgc
aagggcatcggcctcggcggcagcaaggacggcagcggcgagccgtggttcgtcgccgcg
aaggacatcgcgtcgaacacgctgtacgtcgtgcagggccacgatcatccgtggctgctg
tcgcggcagctcgtcgccggcaacgtaagctgggtcgccggcgaaccgccggccgaaggt
cacgcatgcggcgcgaaaacgcgctaccggcaggccgacgccgcgtgcacgttcgcgggc
gccggcggcgagcgcttctcgctcgcgttcgacgacgcgcaatgggcggtcacgcccggg
cagtcggcggtgctgtacgacggcgacgtctgtctcggcggcggcatcatcgaattcgcg
gcaaccggccagcccggccacgccgcgatcgcgcagggccgcacggcggcgctcgccgaa
gcacgctga
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