Burkholderia dolosa: AK34_2533
Help
Entry
AK34_2533 CDS
T03793
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bdl
Burkholderia dolosa
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdl03016
]
AK34_2533
Enzymes [BR:
bdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AK34_2533
Transfer RNA biogenesis [BR:
bdl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AK34_2533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJY12887
LinkDB
All DBs
Position
1:complement(2721216..2723327)
Genome browser
AA seq
703 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQEADAA
AQQIDLDFLWECAPTEEFAYTALADEYYGAASGPVQRAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVIGLLTRPDKNSIEYKA
LEAAAGARGVSPARLMLDCGGIPSARALHEARFLAEFFPHGTGFPPVTVGSLPDDLPRAN
VDAFSIDDITTTEIDDAFSVEHLTDGRVRVGVHIAAPALGIARGDAIDAIARTRLSTVYM
PGDKITMLPDNVVDVFTLKEGDYRPALSLYIIVDRDTQEIVANETRAELVFVKNNLRHNT
LDELVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQQARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRTQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADHQRRMEYFWCLRWLAQEQKKQVVATVVKGDLVRLEEIPLLLHVPALG
VHARGTHVLLEVMSLDELTIEASVRLLNVLDAPAVTGGDASDDEDDAEGADDRDGTLIDA
EDETAETEAEALAEADGASAGEGAEGDRGANGADGAGGEGRAS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagctgcccggcgggcggcgcgcgaaggtccgcgcgaaggac
gtgctgatcgaattcgagaagccggccgcgggcgaactgatgcaggaggccgatgcggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccgaccgaggaattcgcgtat
acggcgctggccgacgagtactacggcgcggcgtccggcccggtccagcgcgcggcgctc
gtgctgcggctgcatggctcgcccgtctatttccgccgcaaggggcgcggtcagtaccag
cgtgcgccggaagagcagctgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctggtgcaggcgcagtatgaagaggagctgaaggccggcaagctgccggaagcgttc
gccggcaaggtgatcgggctgctcacgcggccggacaagaattcgatcgaatacaaggcg
ctggaggccgcggccggcgcgcgcggcgtgtcgcccgcccggctgatgctcgattgcggc
gggattccgtccgcgcgtgcgctgcacgaggcgcgctttctcgcggaattcttcccgcac
ggcaccggctttccgccggtcacggtcggcagcctgccggacgatctgccgcgcgcgaac
gtcgacgcgttctcgatcgacgacatcacgacgaccgaaatcgacgatgcgttctcggtc
gagcatctgaccgacggccgcgtgcgggtcggcgtgcacatcgcggcgccggcgctcggc
atcgcgcgcggcgacgcgatcgacgcgatcgcgcgcacacgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacaacgtcgtcgacgtgttcacgctgaaggaa
ggcgactaccggccggcgctgtcgctgtacatcatcgtcgaccgcgacacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgttcgtgaagaacaacctgcgccacaacacg
ctcgacgagctcgtcacggaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgctgttcgagaagcgccagcaggcg
cgcgccggctatgggctgaagcgcgaagtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggttcgccgctcgacctgatcgtg
tccgagctcgcgattctcgcgaactcgacgtggggcgcgttcctgcacgaccacacggtg
cccggcatctaccgcacgcagcgcggcttcggcgcgccggggccgaagcgcacgcggatg
cagacgaccgccgcaccgcacgaggggctcggcgtcgcgcagtacgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgcggacctgtacgcggtc
gtgcagggcttcgacgacacgtacagcgcgtacgccgaccatcagcgccggatggaatat
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgaccgtcgtg
aagggcgatctcgtgcgcctcgaagagatcccgctgctgctgcacgtgccggcgctcggc
gtgcatgcgcgcggcacgcacgtgctgctcgaggtgatgtcgctcgacgagttgacgatc
gaggcgtcggtgcggctgctgaacgtgctcgacgcgccggccgtgacgggcggcgacgcg
tccgacgacgaagacgatgccgaaggcgccgacgatcgcgacggcacgctgatcgacgcg
gaagacgaaacggccgagaccgaagcggaagcgcttgccgaagcggacggcgcgtccgcc
ggcgaaggcgctgaaggcgaccgcggcgcgaacggcgcggacggcgctggcggcgagggg
cgcgcatcgtga
DBGET
integrated database retrieval system
