Burkholderia dolosa: AK34_3080
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Entry
AK34_3080 CDS
T03793
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bdl
Burkholderia dolosa
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdl03016
]
AK34_3080 (trmE)
Transfer RNA biogenesis [BR:
bdl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AK34_3080 (trmE)
Prokaryotic type
Methyltransferases
AK34_3080 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
GTP_EFTU
Ras
Roc
DUF374
Motif
Other DBs
NCBI-ProteinID:
AJY13613
LinkDB
All DBs
Position
1:3310954..3312348
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AA seq
464 aa
AA seq
DB search
MLATDSDPIVAIATAAGRGGIGVVRVSFGRGGEAAALPLIDALCGQRLAPRHASYVPFLD
AHGAPLDRGIALYFPAPHSYTGEHVLELQGHGGPIVMQLLLQRCLDAGRGFGLRLAEPGE
FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRQIHALVDHVINLRMLV
EATLDFPEEEIDFLEAADARGKLAKIREQLTHVLGDARQGALLREGLSVVLAGQPNVGKS
SLLNALAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHIIDTAGLRETDDEVERIGIARTW
SEIERADVVLHLLDSRTGMTADDERIAARFPAGVPVVRVLNKTDLTGVPACVEHPAAEGD
LTDVHLSAKRGDGIDLLRAELLRIAGWQAGAEGVYLARERHLIALRAAQAHLAQAADHAE
QRAQSLDLFAEELRLAQEQLNSITGEFTSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctaccgactccgatccgatcgtcgccattgccaccgctgccggccggggcggc
atcggcgtcgttcgcgtatcgttcgggcgcggcggcgaggcggccgcgctgccgctgatc
gacgcgctgtgcgggcagcggctcgcgccgcgccatgcgagctacgtgccgtttctcgac
gcgcacggcgcaccgctcgaccgcgggatcgcgctgtactttccggcgccgcattcgtac
accggcgagcacgtgctcgaactgcaggggcacggcggcccgatcgtgatgcagctgctg
ctgcagcggtgcctggacgcgggccgcggcttcgggctgcggctcgcggagcccggcgag
ttcacgcggcgtgcgtttttgaacgacaagctcgaccttgcgcaggccgaggcggttgcc
gacctgatcgaagcgagtaccgaagcggccgcgcgctcggccggccgttcgctcgacggc
gcgttttcgcggcagatccatgcgctcgtcgaccacgtgatcaacctgcggatgctcgtc
gaagcgacgctcgatttcccggaggaggagatcgactttctggaggctgccgatgcgcgc
ggcaagctcgcgaagatccgcgagcagctcacgcacgtgctcggcgatgcgcggcagggc
gcgctgctgcgcgagggcttgtcggtcgtgctggccggacagccgaacgtcggcaagtcg
tcgctgctcaatgcgctggccggcgcggagctcgcgatcgtcacgccgatcgccggcacg
acgcgcgacaaggttgcccagacgatccaggtcgaagggattccgctgcacatcatcgac
acggccgggttgcgcgagaccgacgacgaagtggagcggatcggcattgcgcgcacgtgg
agcgagatcgagcgcgcggatgtcgtgttgcatctgctcgattcgcgtaccgggatgacc
gccgacgacgaacggatcgccgcgcggtttccggccggcgtaccggtcgtgcgcgtgctg
aacaagacggatctgaccggcgtgccggcgtgcgtcgagcatcctgcggccgagggcgat
ctgaccgacgtgcatctgtcggcgaagcgcggcgacggcatcgacttgctgcgcgccgaa
ctgctgcggatcgcgggatggcaggcgggcgccgaaggcgtctatctcgcgcgcgagcgg
catctgatcgcgctgcgcgcggcgcaagcgcatctcgcgcaggccgccgatcacgcggag
caacgcgcgcagtcactcgatctgttcgcggaggaactgcgcctcgcgcaggagcagctc
aattcgattaccggggaatttacgtcggacgatctgctgggggtgattttcagcaggttt
tgcatcgggaagtag
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integrated database retrieval system
