Burkholderia dolosa: AK34_4533
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Entry
AK34_4533 CDS
T03793
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bdl
Burkholderia dolosa
Pathway
bdl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AK34_4533 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdl03021
]
AK34_4533 (rpoD)
Transcription machinery [BR:
bdl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AK34_4533 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
AJY09510
LinkDB
All DBs
Position
2:complement(1606528..1608576)
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AA seq
682 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEELEE
RRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAET
LLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIA
KRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNAADTDTDGFSA
KEAEAIENEDEDAEEEEEEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMR
RAFEKEGYKSKAYLKAQETIQSELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHIVV
DKCGMPRSEFIARFPGNETDLDWAEKIAAEGHPYSAVLSRNIPAIREQQQRLLDLQARVV
LPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGL
MKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQ
ETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPA
DAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEA
KALRKLRHPSRSDKLKSFLEGN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaatcagagcgacgagcag
cccgcagccgcggctgcgccgggcaaatccaaggtgcgcgatcgccgcgccaaggaaaag
gcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaagaa
cgccgcgtgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacgtac
gccgaaatcaacgatcacctgccggacaacttcaccgagaccgaagcgctcgaaggcatc
atcggcacgttcaacgacatgggcgtggcggtttacgagcaggcgccggacgcggagacg
ctgctcctgaacgacaacgcgccggccgcatcgtcggacgacgaagtcgaagaggaagcg
gaagtcgcgctgtccaccgtcgattcggaattcggccgcacgaccgatccggtccggatg
tacatgcgcgagatgggcacggtcgagctgctcacgcgcgaaggtgaaatcgagatcgcg
aagcggatcgaggacggtctgcgtcacatggtgatggcgatttccgcgtgcccgacgacg
attgccgacatcctcgcgatggccgagcgcgtcgcgaacgaggagatccgcgtcgacgag
ctcgtcgacggcctgctcgatccgaacgcggccgataccgacaccgacggtttctccgcg
aaggaagcggaagcgatcgagaacgaggacgaggacgccgaagaggaagaggaagaagag
gaagaagaggacgatgacggcgccgcgcaggcgaccgccaacgccgctcagctcgaagcg
ctgaagcgcgcgtcgctcgagaagttcgcgctgatcagcgagtggttcgacaagatgcgc
cgcgcgttcgagaaggaaggctacaagtcgaaggcgtacctgaaggcgcaggaaacgatc
cagagcgagctgatgacgatccgcttcaccgcgcgcaccgtcgagcgcctgtgcgacacg
ctgcgtgcgcaggtggacgaagtgcgtcaggtcgagcgtcagatcctgcacatcgtcgtc
gacaagtgcgggatgccgcgttcggaattcatcgcgcgctttccgggcaacgagacggat
ctcgactgggccgagaagattgccgccgaaggtcatccgtacagcgcggtcctgtcgcgc
aacatcccggcgatccgcgaacagcagcagcgtctgctcgacctgcaggcgcgtgtcgtg
ctgccgctgaaggatctgaaggaaaccaaccgccagatggcggccggcgaactgaaggcg
cgtcaggcgaagcgcgaaatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaag
aagtacacgaaccgcgggctgcagttcctcgacctgatccaggaaggcaacatcggcctg
atgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacttacgcgacg
tggtggatccgtcaggccatcacgcgttcgatcgcggatcaggcgcgtacgatccgtatt
ccggttcacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcag
gaaaccggtctcgagccggatccggcaacgctcgccgagaagatggagatgccggaagac
aagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggc
gacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcg
gacgccgcgctgcatgcaagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacg
ccgcgcgaggcgaaggtgctgcggatgcgtttcggcatcgagatgagcaccgatcacacg
ctcgaggaagtcggcaagcagttcgacgtgacgcgtgagcggatccgtcaaatcgaagcc
aaggcgctgcgcaagctgcgtcatccgagccgttccgacaagctgaagtcgttcctcgaa
gggaactga
DBGET
integrated database retrieval system
