KEGG   Burkholderia dolosa: AK34_4547
Entry
AK34_4547         CDS       T03793                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bdl  Burkholderia dolosa
Pathway
bdl03030  DNA replication
bdl03410  Base excision repair
bdl03420  Nucleotide excision repair
bdl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AK34_4547 (polA)
   03410 Base excision repair
    AK34_4547 (polA)
   03420 Nucleotide excision repair
    AK34_4547 (polA)
   03440 Homologous recombination
    AK34_4547 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdl03032]
    AK34_4547 (polA)
   03400 DNA repair and recombination proteins [BR:bdl03400]
    AK34_4547 (polA)
Enzymes [BR:bdl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AK34_4547 (polA)
DNA replication proteins [BR:bdl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AK34_4547 (polA)
DNA repair and recombination proteins [BR:bdl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AK34_4547 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AK34_4547 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 NYN_YacP
Other DBs
NCBI-ProteinID: AJY09353
LinkDB
Position
2:complement(1623845..1626598)
AA seq 917 aa
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDELYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVDGVEADDV
IGTLAREAERRGMNVIVSTGDKDLAQLVTEHVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYGTLDGVIEHAAEIKGVVGDNLRRALDFLP
LGRKLVTVDTACDLAPHLESIDASLKTDGEARDLLRDIFARYGFKTWLREIDSAPAEGSD
TDAPDGEPAPVIASGVAREYDTIQTWAQFDAWLAKLDAAELTAFDTETTALDPMVARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRRKVGQHLKYDAQVLAN
YGIELNGIEHDTLLESYVLESHRTHDMDSLALRHLGIKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHRALYPQIAREPGLERVYREIEMPVSHVLRKMERTGVLIDDAL
LHAQSTEIATRLIELEAQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIAAPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNADQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FTRYPGVAQYMENTRASAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDQWLTRDKLASRMIMQVHDELVLEVPDDELPLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcggggccctggcggggagccgactgga
gcgctctacggaatcatcaacatgctgcgccgcatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcgaagggcaagacgtttcgcgacgagctttatgcggactat
aaggcaaaccgtccgtcgatgccgccggatctcgcattgcaggtcgagccgatccacggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgacggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagcggaacggcgcgggatgaacgtgatcgtgtcgacgggc
gacaaggacctcgcgcagctcgtcaccgagcacgtcacgctcgtcaacacgatgaccaac
gaaacgctcgaccgcgacggcgtgatcgcgaaattcggcgtgccgccggaacggatcatc
gattatctggcgctgatcggcgacacggtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgtcgcagtacggcacgctcgacggcgtgatcgagcat
gcggcggagatcaagggcgtggtcggcgacaacctgcgtcgcgcgctcgacttcctgccg
ctcggccgcaagctcgtcacggtcgataccgcatgcgatctcgcgccgcatctcgaatcg
atcgacgcgtcgctgaagaccgacggcgaagcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaaatcgacagcgcgcccgccgaaggcagcgac
accgatgcgccggacggcgagcccgcgccggtgatcgcatccggtgtcgcgcgcgaatac
gacacgatccagacatgggcgcagttcgacgcgtggctcgcgaagctcgacgcggcggaa
ctcaccgcattcgacaccgagacgaccgcgctcgatccgatggttgcgcggctcgtcggc
ctgtcgttctcggtcgagcccggcaaggccgcgtatctgccggtcgcgcaccgcgggccc
gacatgcccgagcagctgccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgag
tcggccgatcgcaggaaggtcggccaacatctgaagtacgacgcgcaggtgctcgcgaac
tacgggatcgagctgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgcttcgtcatctgggcatcaagacgatc
aagtacgaagacgtcgcgggcaagggcgcgaagcagatcggcttcgacgaagtggcgctc
gcgcaggccgccgaatacgcggcggaagacgcggacatcacgttgcagctgcatcgcgcg
ctgtatccgcagatcgcgcgcgagccgggcctcgaacgcgtgtatcgcgagatcgagatg
ccggtgtcgcacgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgatgcgctg
ctgcacgcgcagagcaccgaaatcgcgacgcggctgatcgaactcgaagcgcaggcgtac
gaactggcgggcggcgaattcaatctcggctcgccgaagcagatcggccagatcttcttc
gagaagctgcagctgccggtcgtgaagaagacgccgagcggcgcaccgtcgaccgacgag
gaagtgctgcaaaagctggcggaggattacccgctgccgaagctgctgctcgagcatcgc
gggttgtcgaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaatccggcg
acgggccgcgtgcatacgaactacgcgcaggccgtcgcggtcacgggccgcctcgcatcg
aacgatccgaatcttcagaacattccggtgcgaaccgcggaaggccggcggatccgcgag
gcgttcattgcggcgcccggccaccggatcgtgtcggccgactattcgcagatcgagctg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcaacggcggcggaggtgttcggcgtgacgccgctggaggtgaacgcc
gaccagcgccggatcgcgaaggtcatcaacttcgggctgatctacgggatgagcgcgttc
gggctggcatcgaacctcgggatcacgcgcgacgcggcgaagctttatatcgaccgctat
ttcacccgttatccgggcgtcgcgcagtacatggaaaacacgcgcgcgtccgcgaaggag
aagggctacgtcgaaacggtgttcggccggcgcctgtggctgccggagatcaacggcggc
aacggtccgcgtcggcaggcggccgagcgcgcggcgatcaatgcgccgatgcagggcacc
gcggccgacctgatcaagctgtcgatgatcgcggtcgaccagtggctcacgcgcgacaag
ctcgcgtcgcggatgatcatgcaggtgcacgacgaactggtgctcgaggtgccggacgac
gaactgccgctcgtgcgcgagaagctgcccgaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgccgaagtcggtgccggcgcgaactgggaagaggcgcactga

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