Burkholderia dolosa: AK34_4835
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Entry
AK34_4835 CDS
T03793
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK34_4835
Enzymes [BR:
bdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AK34_4835
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AJY10641
LinkDB
All DBs
Position
2:complement(1923734..1925737)
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AA seq
667 aa
AA seq
DB search
MDDENDSAVLEAHVGTRSPCWRLGSDSNALELAALRGHTNIAIALTNEQAARIRALTGVT
SHLVLDITLFGHSLGLHLVGKKVNTTDWAGTASAYSDTASVAGDLAHGLAFAEQVVSEVN
SLVVILDRNGMVQRFNRLCEEVTGKREVDVIGRSAFELFMSPEEGAQSRSNITGFFASNR
AFAVERYINTVNGPRLFQFRNKFVQSGSGVDEQFLICSGIDITDERLAERRLTELANTDV
LTGLPNRHAISERIQTLISRENDGTRGQVGILFLDLDNFKRVNDHYGHITGDRLLQDVSS
IIAGCLPSGATLARLGGDEFLVLFEQATRALLEATAQIILERLRTPIHLGLMEVYTSCSI
GIAMHPQHGDSLETLIRSADTAMYVAKEAGKHTYRVFSLDMNQKVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVHGVEALIRWQSPDRGLVAPVEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAKGLGVRIAVNVSARQLQDTNIVHQFASILDSAGLKPGLLDIELTESSFI
EDEHAARGLMKQFRQLGAEIHLDDFGTGYSSLSQLSRLPLDAIKLDRSFITGIDRNSRSQ
ALVRSVVSLARALNFSVIAEGVETRAEAEFLKQIDVDHAQGFYYARPMPAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagtgcggtgctcgaggcgcacgtcggtacgcgcagcccctgc
tggcgtctcggcagcgacagcaatgcactcgaactggccgccttgcgcggccacaccaat
atcgcgattgcgctgacgaacgagcaggccgcacgcattcgcgcgctgaccggcgtcacg
tcgcacctcgtgctcgacatcacgctgttcggccattcgctcggcctgcatctggtcggc
aagaaggtcaacacgaccgactgggccggcaccgcatccgcgtattccgatacggcgtcc
gtcgccggcgatctcgcgcacgggctcgcgttcgccgagcaggtcgtctccgaagtgaat
tcgctcgtcgtgattctcgaccgcaacggaatggtgcagcgcttcaaccggctgtgcgag
gaagtgacgggcaagcgcgaggtcgacgtgatcgggcgcagcgcgttcgaactgttcatg
agcccggaggagggcgcgcagtcgcgcagcaacatcaccggctttttcgcgagcaaccgc
gcgttcgcggtcgagcgctacatcaataccgtgaacgggccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggcgtcgacgagcagttcctgatctgctcgggcatc
gacatcaccgacgaacgcctcgcggagcggcggctcaccgagctcgcgaacaccgacgtg
ctgaccggcctgccgaaccgtcatgcgatcagcgagcgcatccagacgctgatctcgcgg
gagaacgacggcacgcgcggccaggtcggcatcctgttcctggatctcgacaacttcaag
cgcgtcaacgatcactacgggcacatcaccggcgaccggctgctgcaggacgtgtcgtcg
atcatcgccggctgcctgccgtccggcgcgacgcttgcgcggctcggcggcgacgagttc
ctcgtgctgttcgaacaggcgacgcgcgcgctgctcgaagcgactgcgcagatcatcctc
gaacggctgcgcacgccgattcatctcgggctgatggaggtctacacgagctgctcgatc
ggcatcgcgatgcatccgcagcacggcgattcgctcgagacgctgatccgcagcgccgac
accgcgatgtacgtcgcgaaggaggccggcaagcatacgtaccgcgtgttctcgctcgac
atgaaccagaaggtcgcgaagtacatgtggctcgacacgaacctgcgcaaggcgctcgag
gaagagcagttcgtgctgcattaccagccggtcgtcgacatcgcaaccggcgacgtgcac
ggcgtcgaggcgctgatccgctggcaatcgcccgatcgcgggctcgtcgcgccggtcgag
ttcatccgcttcgcggaggagtcggggctgatcgcgccgctcgggcgctgggtgatgcgg
acggccgccgcgcaggctgccgcgtggaaggcgaagggactcggcgtgcggatcgcggtg
aacgtgtccgcgcgacagttgcaggacacgaacatcgtccatcagttcgcgtcgattctc
gacagcgcggggctgaagccggggctgctcgacatcgagcttaccgagagcagcttcatc
gaggacgaacacgcggcgcgcgggctgatgaagcagttccgtcagctgggcgcggagatc
catctcgacgatttcggcaccggctattcgtcgctgtcgcagttgtcgcgtctgccgctc
gatgcgatcaagctcgatcgcagcttcatcaccgggatcgaccgcaactcgcgctcgcag
gcgctcgtgcgctcggtcgtgtcgctcgcgagggcattgaatttctcggtgatcgccgaa
ggcgtcgaaacgcgcgcggaagccgagttcctgaagcagatcgacgtcgaccatgcgcag
ggcttctactacgcgcggccgatgccggcccaggcattcgaagcctggctcgccgaaacg
agaaagctcaggctcatcgcctga
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