Burkholderia dolosa: AK34_792
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Entry
AK34_792 CDS
T03793
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl03030
DNA replication
bdl03430
Mismatch repair
bdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK34_792 (dnaE)
03430 Mismatch repair
AK34_792 (dnaE)
03440 Homologous recombination
AK34_792 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdl03032
]
AK34_792 (dnaE)
03400 DNA repair and recombination proteins [BR:
bdl03400
]
AK34_792 (dnaE)
Enzymes [BR:
bdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK34_792 (dnaE)
DNA replication proteins [BR:
bdl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK34_792 (dnaE)
DNA repair and recombination proteins [BR:
bdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK34_792 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AJY12815
LinkDB
All DBs
Position
1:852551..856084
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAASLAASLRLPVVATHPTQFMTADDFTAHEARVCISEGDILANPRRQKRFTTEQY
FRTQDEMVALFADLPSAIANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSRE
GLEKRLAQLYPDEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLSQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLSREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCIANNLVVLPPDINLSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRARDEKPFTDLFDFCERIDRRIVNRRTIEALIRAGAFDSLNANRAQLLA
SVPLAMEAADQAEANALQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKIGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMN
GNADAAVLRRVLEPHVSKHDPAAAHAMDAPAPRGGGRDGGRRQQAPLPNGLAVQIHYSNA
RAQGEMRLGDAWRVKPSDALLAELRATFGGSTVEIAY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgacatcgtcaaggcggcggccgcagacggccagggcgcgctcgcc
ctcaccgatctcggcaacgcgttcggcctcgttcgtttctatcaggaagcccgcggcaaa
ggcatcaagccgatcgccgggtgcgacgtctggatcgccaatccggacgaccgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctgtgcgaactg
ctgtcgaaggcatggctgacgaaccagtatcgcggccgcgccgagctcgacgcgagctgg
ctcgaaggagaactgtcgcaggggctgctcgcgctgtcgggcgcgcagcagggcgacatc
gggctcgcgctcgcggcgggcaacgaggaggctgcgcgccgccacgccgagcgctgggcg
aaggtatttccgggcggcttctacatcgagctgcagcgttacggtcagccgggcgccgag
gcgtatatccagcaggcggcgtcgctcgccgcgtcgctgaggctgccggtcgtcgcgacg
catccgacgcagttcatgactgcggacgacttcaccgcgcacgaggcgcgcgtgtgcatt
tccgaaggcgacatcctcgcgaacccgcggcgccagaagcgcttcacgaccgagcagtac
ttccgcacgcaggacgagatggtcgcgctgttcgcggatctgccgtccgcgatcgcgaac
acggtcgagatcgcgaagcgctgcaatctgaagctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactatctcgttcagctgtcgcgcgaa
gggctcgagaagcgcctcgcgcagctgtatccggacgaagccgaacgcgacgcgcagcgc
gacacgtactacaagcggctcgaattcgagtgcgggaccatcacgaagatgggctttccc
ggctacttcctgatcgttgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
gggccgggccgcggctcgggcgccggttcgctggtcgcgtacgcgctcggcatcaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgccgtgtcgcagatcgccacgttcggcacgatggccgcg
aaggcggccgtgcgcgacatcgggcgcgtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgattccgttcaagcccggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgcagctgcaggagcgctacgacaacgaggacgaagtccatcagctgctcgac
cttgcgcagcgcgtcgagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgccgggcaagctgaccgacttctgcccgctgtacacgcagggcgacgacggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctcggcctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgtctcgat
ccgtcgaaggccgactggtcgctgtcgcaggtgccgctcgacgatccggcatcgttccag
atcctgaagaaggcgaacacggttgccgtgttccagttggaaagccgcgggatgcagggg
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggatctgatcccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgattatccggatccgcgcgtcgaacccgtcctgaaagagacctacggaatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggcgcggcgaagaacgggctgtcgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtatgcg
ctgctcgcgtactacaccgcgtggctgaaggcgcatcatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcatc
gcgaacaacctcgtcgtgctgccgccggacatcaacctttcgcattaccggttcgagccg
gtcgccgaagccgacggcaagcgttcgcgcacgatccgctacggcctcggcgccgtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcgcgcgacgaaaagccgttcacc
gatctgttcgatttctgcgagcggatcgaccgccgcatcgtcaatcgccgcacgatcgaa
gcgctgatccgcgcgggcgcgttcgattcgctgaacgcgaaccgcgcgcaactgctcgcg
tcggtgccgctcgcgatggaggcggccgatcaggccgaagcgaacgcactgcaggccggc
ctgttcgacatgggcgcggagtcgccgcacgcgcacgcgctcgtcgacgagccggcgtgg
gacgacaagcggcgtctgcaggaggagaagggcgcgctcggcttctatctgtccggtcac
ctgttcgacgcgtatcgcgacgaggtgcgccgcttcgtgcgccagaagatcggcgatctg
aaggaagggcgcgacaagctcgtcgccgggatcatcgcgtcgctgcgtacgcagatgact
cagcgcggcaagatgctgatcgcgctgctcgacgacggcaccggccagtgcgagatcacg
attttcaacgagcagttcgaggccaacaaggcgctgttcaaggaagacgagctgctgatc
gtgcagggccaggcgcgcaacgacgcattcacgggcggcatccgctttaccgccgacacc
gtgatggatctcgaacgcgcgcgcagccgctacgcgcaggcggtgcggctgacgatgaac
ggtaacgcggacgcggcggtgctgcgccgcgtgctcgagccgcacgtgtcgaagcacgac
cctgccgcggcgcacgcgatggacgcgccggcgccgcgcggcggcggacgcgacggcggc
cgtcgccagcaggcgccgttgccgaacgggctcgcggtgcagatccactacagcaacgca
cgcgcgcagggcgagatgcggctgggcgatgcgtggcgcgtgaagccgagcgatgcgttg
ctcgcggagctgcgtgcgaccttcggcggcagtaccgtcgaaatcgcgtattga
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integrated database retrieval system
