Brevundimonas diminuta: EQG53_04035
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Entry
EQG53_04035 CDS
T05851
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bdm
Brevundimonas diminuta
Pathway
bdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQG53_04035 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdm03021
]
EQG53_04035 (rho)
03019 Messenger RNA biogenesis [BR:
bdm03019
]
EQG53_04035 (rho)
Transcription machinery [BR:
bdm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EQG53_04035 (rho)
Messenger RNA biogenesis [BR:
bdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EQG53_04035 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
OB_RNB
Fungal_virus_P2_C
NACHT
S1CSD-TOTE-2
AAA
AAA_14
AAA_25
DUF6360
Motif
Other DBs
NCBI-ProteinID:
QAT16036
LinkDB
All DBs
Position
801611..802861
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AA seq
416 aa
AA seq
DB search
MQELNEKTPEDLVAFAEGLDIENAGNLRKQDLLFAILKTLADEEVEIIASGVLEILPDGF
GFLRSPDANYLPGPDDVYVSPSQIRRFGLRSGDTVHGAVRGPREGERYFALLKVDTINFE
DPEMVKTKVLFDNLTPLYPEERLHMEIQDPTLKDRSGRVIDIVAPLGKGQRCLIVAPPRV
GKTVMLQNIAKSIERNHPEVFLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPASRHVAV
AEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNATVPSSGKVLTGGVDANALQRPKRFFG
AARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDVLK
SGTRKEDLITPKDQLAKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNADFFQSMNT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggaactgaacgagaagacgccggaagacctggtcgccttcgccgaaggcctggac
atcgagaacgccggcaacctgcgcaagcaggatctgctgttcgccatcctgaagaccctg
gcggacgaagaggtcgaaatcatcgcctcgggcgtgctggagatcctgccggacggcttc
ggcttcctgcgcagcccggacgccaactatctgccgggaccggacgacgtctatgtctcg
ccgtcgcagatccgtcgcttcggcctgcgctcgggcgacacggtgcacggcgccgtgcgc
ggcccgcgcgagggcgagcgctacttcgccctgctcaaggtcgatacgatcaacttcgaa
gatccggagatggtcaagaccaaggttctgttcgacaacctgacgccgctctaccccgaa
gagcggctgcacatggaaatccaggatccgacgctgaaggatcgctcaggccgggtcatc
gacatcgtcgccccgctcggcaagggccagcgctgcctgatcgtcgctccgccgcgcgtg
ggcaagacggtcatgcttcagaacatcgccaagtcgatcgagcgcaaccatccggaagtc
ttcctgatcgtcctgctgatcgacgaacgcccggaagaagtcaccgacatgcagcggacg
gtgaaaggcgaggtcgtcgcctcgaccttcgacgagcccgcttcgcgtcacgtcgccgtg
gccgaaatggtgatcgaaaaggccaagcgtctggtcgagcacaagaaggacgtggtgatc
ctgctggactccatcacccgcctgggccgcgcctataacgccaccgtcccgtcgtcgggc
aaggtgctgaccggcggcgtcgacgccaacgccctgcaacgtcccaagcgcttcttcggc
gccgcgcgcaatgtggagcagggcggttcgctgaccatcatcgccacggccctgatcgac
accggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaactcggaa
atcgtgctggaccgcaaggtcgccgacaagcgcatcttcccggcgatcgacgtgctcaag
tccggcacccgcaaggaagacctcatcacgccgaaggaccagctggccaagacctatgtc
ctgcgccgcatcctcaacccgatgggtccgcaggacgcgatcgagttcctgctcgacaag
ctgcgccagtcgaagaacaacgcggacttcttccagtcgatgaacacctga
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