Brevundimonas diminuta: EQG53_10360
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Entry
EQG53_10360 CDS
T05851
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bdm
Brevundimonas diminuta
Pathway
bdm03030
DNA replication
bdm03430
Mismatch repair
bdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQG53_10360
03430 Mismatch repair
EQG53_10360
03440 Homologous recombination
EQG53_10360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdm03032
]
EQG53_10360
03400 DNA repair and recombination proteins [BR:
bdm03400
]
EQG53_10360
Enzymes [BR:
bdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQG53_10360
DNA replication proteins [BR:
bdm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EQG53_10360
DNA repair and recombination proteins [BR:
bdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EQG53_10360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QAT14729
UniProt:
A0A410NXZ0
LinkDB
All DBs
Position
2080386..2083841
Genome browser
AA seq
1151 aa
AA seq
DB search
MADAVNSQGFVHLRVRSAYSLLEGAIKAGKIGKMAADAGMPAVAVADRANLFGALEFSQT
TKDAGVQPIVACALPVLDIGGQVAQRWAKTPTVVLIAQNEQGWLNLCALSSAAYLDAGEM
AEPGVPWGQVVDKSEGLILLSGGPDGPIDPLFVQKKPAEAAEALAEMKRVFGDRFYVELQ
RHGLSSETLAEGGLVEWAYANDTPLVATNDVYYAKAAQAKSHDALLCISDGAFTGQEDRR
RVTGEHWFKSAEAMRELFADLPEACDNTIQIARRCAFLVKTHKPILPRFDTGAGRSEDDE
LAHQAREGLKARLEKNQAYAPEEDYWSRLEWEVGIIQQMGFPGYFLIVADFIKWAKLHDI
PVGPGRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVID
YVQDHYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLAKMVPANPANPVTLAQA
IDLEPRLREARDAEPAVKALLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRS
TIPASQFNMKWVEPAGLVKFDFLGLKTLTVLDRAKSYLERRGAAQDWGLLPLDDPKTYEL
MASGQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEV
DYLHPSLKEVLTETYGVIIYQEQVMKIAQILAGYSLGEADLLRRAMGKKKKEEMDFQRLR
FVKGASEKGVPEAQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANHPVEFFAAS
MSLDLSNTDKLAVFYQDCRRFEVPVLVPDINRSSADFDVSWKDGQGSVLYALGAIRNVGL
EAMKHVIEVRETGGPFTDIFDFLERVDPKAVNKRALEGLARAGAFDSIHPNRRQLFEQAD
VLMAYCQSVAAERASSQVSLFGADQAAAARPRLKSMEPWAGPDKLDQELYAVGFYLSGHP
LEELTPALKRKRVTFVAEAQGLAEAGHEAFQMAGVVRRRQERASARTGEKFAFVTFSDPT
GEFECLFPPEQLRRCREVLEVGTSVLVKVRAKAADGEVRFFGDDASRMDVLLDDAQIGLR
VILSAQSADAEALKARLDRARAQGKGGEVWLQATLGGRTEVEIKLPGRYRLDAALRGALK
SAPGVVMLEDA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
ttggcggatgcggtgaacagtcagggctttgtccacctgcgggtccgcagcgcctattcg
ctgctggaaggcgccatcaaggccggcaagatcggcaagatggccgccgatgccggaatg
ccggccgtggccgtggctgaccgcgccaacctgttcggggcccttgagttcagccagacg
accaaggatgcgggcgtccagcctatcgtcgcctgcgccttgccggtgctcgatatcggc
gggcaggtcgcccaacgctgggccaagacgccgacggtcgtgctgatcgcccagaacgag
caggggtggctcaacctgtgcgccctgtcgtccgccgcctatctggacgcgggcgaaatg
gccgagccgggcgtgccctgggggcaggttgtggataagtccgaggggctgatcctgctg
tccggcgggccggacggccctattgatcctctgttcgtgcagaagaagccggccgaggcc
gccgaagccctggcggagatgaagcgggtgttcggcgaccgcttctatgtcgaactgcaa
cgccacggactgtccagcgagacgttggccgagggcgggctggttgaatgggcctacgcc
aatgacacgccgctggtcgcgaccaatgacgtctattacgccaaggcggcccaggcgaag
tcgcatgacgccttgctgtgcatttccgacggcgccttcacgggtcaggaggatcgccgt
cgcgtcaccggcgagcactggttcaagtcggccgaggcgatgcgcgaactgttcgccgat
ctgccggaggcctgcgacaacaccattcagatcgcgcgccgctgcgccttcctggtcaag
acgcacaagccgatcttgccgcgcttcgacaccggcgcaggtcgttcggaagacgacgaa
ctggcgcaccaggcgcgcgaaggcctgaaggcgcggctggagaagaaccaggcctatgcg
cccgaggaagactactggtcccgcctggaatgggaggtcgggatcatccagcagatgggg
ttccccggctacttcctgatcgtggcggacttcatcaaatgggccaagctgcatgacatc
ccggtggggccggggcggggctcgggcgccgggtcgttggtcgcctggtcgctgaccatc
accgacctggaccctctgcggttcggcctgctgttcgagcgcttcctcaaccccgaacgg
gtctccatgcccgacttcgacatcgacttctgtcaggagcggcgcgaagaggtcatcgac
tacgttcaggaccactacggcaaggaccgggtggctcagatcatcactttcggcaccctg
caggcgcgcgccgtgctgcgcgacgtggggcgcgtgctgcagatgccgctgggccaggtg
gaccgcctagccaagatggttccggccaaccccgcgaaccccgtgaccctggcccaggcc
atcgacctggagccgcgcctgcgcgaggcgcgtgacgccgagcctgccgtcaaggcgctg
ctggagacggcgcttgagctggaaggcctctaccgcaacgcctcgacccacgcggcgggc
atcgtcatcggcgatcggccgctgacggaactggtgccgctgtatcaggatccgcgctcc
accatcccggccagccagttcaacatgaagtgggtcgagccggcgggcctggtgaagttc
gacttcctgggcctgaagacgctgacggtgctggaccgcgccaagagctatctggaacgg
cgcggtgcggctcaggattggggtctgctgccgctggatgatcccaagacctatgagctc
atggcctcggggcagacggtcggggtgttccagctggaatcccagggcatgcgcgacacc
ctgcgcaagatgcgctgcggctcgatcgaagagatcaccgccctgatctccctctaccgg
ccggggccgatggagatgatcgacacctacatcgaccggaagttcggccgagcggaggtc
gactacctgcaccccagcctgaaggaggtgctgaccgagacctacggcgtcatcatctac
caggaacaggtgatgaagatcgcccagatcctggcgggctacagcctgggcgaggccgac
ctgttgcgtcgcgccatgggcaagaagaagaaggaggagatggacttccagcgccttcgc
ttcgtcaagggcgcgtccgagaagggggttccggaggcccagtcaggctccatcttcgac
ctggtggccaagttcgcgggctatggcttcaacaagtcgcacgcggcggcctatgcgctg
atctcgttccagacgggctggctgaaggccaatcacccggtcgagttctttgcggcgtcg
atgagcctcgatttgtcgaataccgacaagctggcggtcttctatcaggactgccgccgg
ttcgaggttccagtcctggtgcccgacatcaaccgttcgtccgccgacttcgacgtgtcg
tggaaggacgggcagggcagcgtgctctatgcgctgggcgccatccgcaacgtgggcctt
gaggcgatgaagcacgtcattgaggtgcgcgagacaggcgggccgttcaccgacatcttc
gatttcctagaacgggtcgaccccaaggcggtgaacaagcgggcgctggaaggtttggcg
agagctggtgccttcgacagcatccatccgaaccgccgtcagctgttcgagcaggccgat
gtgctgatggcctattgccagagcgtggccgccgagcgcgcttcgtcccaggtgagccta
ttcggcgccgatcaggccgccgcggcgcggccgcgcctgaagagcatggagccgtgggct
ggccccgacaaactggatcaggagctttacgccgtcggcttctacctgtctgggcatccg
ctcgaggaactgacgccggccctgaaacgcaagcgcgtgaccttcgtggccgaggcgcaa
ggcttggctgaggcggggcatgaagccttccagatggctggggtggtgcgtcgtcgtcag
gagcgggccagcgctcgcaccggcgagaaattcgccttcgtcaccttttcggacccgacg
ggcgagttcgaatgcctgttcccgcccgaacagcttcggcggtgccgcgaggttctggag
gtcgggacgtcggttctggtcaaggttcgggccaaggcggcggatggcgaggtgcgcttc
ttcggcgatgacgccagccgcatggacgtgctgctggacgacgcccagatcgggctgcgc
gtcatcctgtcggcgcaatccgcggacgccgaggcgctgaaggcgcggctggaccgggcg
cgagcgcagggcaagggcggcgaggtctggctgcaggcgacgctgggcggccgcaccgag
gtcgagatcaagctgccgggacgataccgactggacgcggcgctgcgcggcgcgctgaag
tcggcgccgggggtggtgatgctggaggacgcctga
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