Brevundimonas diminuta: EQG53_17185
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Entry
EQG53_17185 CDS
T05851
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bdm
Brevundimonas diminuta
Pathway
bdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EQG53_17185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdm03400
]
EQG53_17185
Enzymes [BR:
bdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EQG53_17185
DNA repair and recombination proteins [BR:
bdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EQG53_17185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4055
RecJ_OB
Matrilin_ccoil
Motif
Other DBs
NCBI-ProteinID:
QAT16222
UniProt:
A0A410P203
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All DBs
Position
3488880..3490478
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AA seq
532 aa
AA seq
DB search
MTSDDDYAFEGAATQPARDNNPPLSISELSFALKRTLEERFGHVRLRGEISKVNRHASGH
VYLTLKDDKSAIDGVIWKGVVRGLGVQPETGLEVIVTGKITSYPARSSYQIVIESMEAAG
AGALLAQLERLKVKLRDEGLFDPAKKKALPTFPATIGVITSPTGAVIRDILHRIAERWPC
RVIVWPVVVQGDAASGQVANAIRGFDQMTPGGPIPRPDLLIVARGGGSVEDLWCFNDEAL
ARTVAAARIPIISAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRWALSDLEGRL
SRAGARMLEDRRTRLRAAARGLPARPEDLLALPQQRLDHAASRLGSGLHRNVAVHERQLA
VAAGRLTPGLLRARVERGQDRLRGAADRLGAALQAGVARNERRLLQTAGRLSPAPLHRRL
DQRQARLEALTLRLDSVMPRRLERAEDRLAALSRALTTLNPKTPKPGFARIEDAEGAMIA
SAAALSPGQAVRIVFSDGAKDATIDGEGAAPRPTPKPAPRPKAPPAGQGDLF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgacgacgactacgccttcgagggcgcggccacgcagcccgcgcgcgacaac
aatccgccgctgtcgatctcggagctgagcttcgcgctcaagcgcaccctggaggaacgc
ttcggccatgtacggctgcgcggcgagatctccaaagtgaaccgccacgcctcgggccac
gtctatctgacgctcaaggacgacaaatcggccatcgacggcgtgatctggaagggcgtg
gtgcgcggtctgggcgtccaacccgagacggggctggaggtcatcgtcaccggcaagatc
acctcctacccggcgcggtcctcctatcagatcgtgatcgagagcatggaggcggcgggc
gcgggcgccctgctggcccagttggagcggctgaaggtcaagctgcgcgacgaaggcctg
ttcgatccggcgaaaaagaaggccctgccgaccttccccgcgaccatcggcgtcatcacc
agcccgaccggcgccgtcatccgcgacatcctgcaccgcatcgccgagcgctggccctgc
cgcgtgatcgtctggccggtggtggttcagggcgacgccgccagcggtcaggtcgccaac
gccatccgcggcttcgaccagatgacgccgggcggcccgatcccccgccccgacctgctg
atcgtcgcgcgcggcggcggctcggtcgaggatctgtggtgcttcaacgacgaggctctg
gcgcgcacggtcgcggccgcccgcatccccatcatctcggccgtggggcacgagacggac
accacactgatcgacttcgtgtcggaccgccgggccccgaccccgaccggggcggccgag
atcgccacgccggttctggccgacctgcgctgggcgctcagcgatctggaggggcggctg
tcgcgcgccggggcgcggatgctggaagaccgccgcacccgcctgcgcgccgccgcgcgc
ggcctgcccgcccggcccgaagacctgctggccctgccgcagcaacgactggaccacgcc
gccagccgtctgggctccggcctgcaccgcaatgtcgccgtgcatgagcgccagctggcg
gtcgcggcgggtcggctgacgcccggcctgctgcgcgcccgcgtcgagcgcggtcaggac
cgcctgcgcggcgccgccgaccgtctgggcgctgcgcttcaggccggcgtcgcccgcaac
gagcgccgcctgctgcagacggcgggccgcctcagccctgcgcccctgcaccgccgcctc
gatcagcggcaggcgcggctggaggcgctcaccttacgtctggacagcgtcatgccgcgt
cggctggagcgcgccgaggaccgcctcgccgccctgtcccgcgccctgacgacgctgaac
cccaagacgcccaagcccggcttcgcccgcatcgaagacgccgagggcgccatgatcgcc
tcggccgccgccctttcgccggggcaggcggtgcggatcgtcttcagcgacggcgccaag
gacgcgaccatcgacggcgagggcgccgcgccgcgtccgacgcctaagcctgccccgcgc
cccaaggccccgcccgcaggccaaggcgacctgttctga
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