Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0331
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Entry
BBDE_0331 CDS
T04222
Name
(GenBank) GTPase
KO
K03979
GTPase [EC:3.6.5.-]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdn03009
]
BBDE_0331
Ribosome biogenesis [BR:
bdn03009
]
Eukaryotic type
Other ribosome biogenesis factors
BBDE_0331
Prokaryotic type
GTPases
BBDE_0331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP1_OBG
DUF1967
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
BAQ26325
LinkDB
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Position
426520..428211
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AA seq
563 aa
AA seq
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MSDFVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVIFLADQNANSLLDY
RFMPHREAGSGTMGLGDTKDGSKGADLILPVPVGTVIFEAKGPQGARKYPGEQLADLRHV
GDRYVAAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG
KSSLIAAMSSAKPKIADYPFTTLVPNLGVVMAGDSRYTIADVPGLIPGASQGKGLGLEFL
RHIERTEIIAHVIDCATLEPDRDPMSDYRALEHELAEYADKLELPLGAIPIPERPRIVIL
NKVDMPEAKELAEFVKPEFEALGLKVFIISTASHEGLKELNWALAGLVADMRKEVAKREQ
AEEEARVVIKPLEETKNRRRRNDESGSALEFTVERKESGNGDVWYEVLGGKPERWVMQTN
FDNDEAVGYLADRLAKLGVEDELRRKGAKPGDEVRIGRGDRAVEFDWDPTIAAGAEMLDG
AQLGARGVDLRLQGQDGRTQRRTNSERRRQYHEMMDARQAVREAMMAERAAGHWADPSVD
DDRHDENSLFGRGESADTDDVKE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttgtcgatcgcgtgaccgtccacgtcaaaggcggcgacggcggtaacggt
tccgccggcatccgtagggaaaaatacaagccgttggcaggtccgaacggcggtaatggc
ggtaatggcggctccgtgatcttcctagccgatcagaacgccaacagcctgttggattat
cgtttcatgccgcatcgcgaggcgggcagcggcaccatgggtctaggcgacacgaaggac
ggctccaaaggcgccgacctgattctgcccgtgcccgtcggcaccgtgatcttcgaagcc
aaggggccgcagggcgcacgcaagtatccgggcgaacaactcgccgatctgcgtcatgtg
ggcgacaggtacgtggccgccgctggcggcaatggaggccttggcaacgcggcgctggcc
aaccgcacccgtcgtgccccgggctttgcgctgttgggtgaaccaggtgaggaacgcgac
gtgatcctggagctcaagtccatcgccgacgtggcgctcgtgggcttcccctccgcaggc
aaatccagcctcatcgccgcgatgagttccgccaagccgaaaatcgccgattatccgttc
accacactggtgccgaatctcggcgtggtcatggccggcgattcgcgttacaccatcgcc
gatgtgccgggtctgattccgggcgcctcgcagggcaagggactcggtctggaattcctg
cgtcatatcgaacgcacggaaatcatcgcgcacgtcatcgattgcgcgacgcttgaaccc
gaccgcgacccgatgagcgattaccgggcgctggaacatgaattggccgaatatgccgac
aagctggaattgccgctgggcgcgattccgattccggaacgtccgcgcatcgtcatcctc
aacaaggtcgacatgccggaagccaaggaactggccgaattcgtcaagccggaattcgaa
gcgctgggactgaaggtcttcatcatctccaccgcctcgcatgaaggcctgaaggaactc
aactgggccttggctggtctggtggccgatatgcgtaaggaagtggcgaagcgcgagcag
gccgaagaagaggcgcgtgtggtcatcaagccgctcgaagagacaaagaaccgccgccgt
cgtaacgacgaaagcggcagtgcgctcgaattcaccgtggaacgcaaggaatccggcaac
ggtgacgtctggtacgaagtgcttggcggcaagccggagcgttgggtcatgcagaccaat
ttcgacaacgacgaagccgtgggctaccttgccgatcgcctggccaagctgggtgtggag
gatgagctgcgccgcaagggtgccaagccgggagacgaagtgcgcatcggacgcggcgat
cgtgcggtggaattcgattgggacccgaccatcgcggccggtgccgaaatgctcgatggc
gcgcagctgggcgctcgaggcgtggatctgcgactgcaggggcaggacgggcggacacag
cgccgtacgaactccgagcgccgtcgccaataccatgagatgatggacgcccgtcaggcg
gtacgtgaggccatgatggccgaacgtgcggccggccactgggccgatccttccgtggat
gacgaccgccacgacgaaaacagcctgttcggacgcggcgaatccgccgatacggacgac
gtgaaagaatag
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