Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0388
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Entry
BBDE_0388 CDS
T04222
Name
(GenBank) truncated cystathionine gamma lyase
KO
K26365
canavanine-gamma-lyase [EC:
4.4.1.43
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BBDE_0388
Enzymes [BR:
bdn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.43 canavanine-gamma-lyase
BBDE_0388
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BAQ26382
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Position
complement(500701..501945)
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AA seq
414 aa
AA seq
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MTSELVHHGQSFDDQPLGFGTKSIHLGNGVDKETGAIRRPITLANAYALPYDPSDINWSS
SDVNLYTRNGHPNQRYLEAKLANLEGAEDAVVLASGVAALAATFTTFLNRGDHAIFSDTT
YIAAYRLLNQILPEKYGIETSIVDTSDPANVLNAIKPNTKLVHLETPANPTLKVTDIASV
TSIAREAQERLGHDILVSVDNTFNSPYNVRPLELGADIVVESLTKYINGHGDALGGMIAT
TKARTDEIRFTAQVNYGGIISPFNAWLINRGTVTLPLRMKQHNASAQAIAEHLERIDAVR
FVSYPGLESHPGHTVATSQKAHPAAGYGGVLAFGLNTDHEGHNRFVSKLNVITSAVSLGH
DESLIVFLGEDDERQYLYPQEFHQGFFRLAVGLEDTDDLIRDIDHALTEAGLME
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaactcgtacaccacggacaatcattcgacgaccagccgctcggcttcggc
accaaatccatccacctcggcaacggcgtggacaaggagaccggagcgatccgacggccg
atcaccctggccaacgcctacgcactgccctacgacccgagcgacatcaactggtcaagc
tcggacgtgaacctctatacgcgcaacggacacccgaaccagcgttatctcgaggcgaaa
ctcgccaatctcgaaggagccgaggacgccgtcgtgctcgcctcaggcgtggccgcactc
gccgccaccttcaccaccttcctcaaccggggcgaccatgcaatcttctccgacacgaca
tacatcgccgcataccggctcctcaaccagattctgcccgagaagtacggcatcgaaacc
tccatcgtcgacacctccgacccggccaacgtactcaacgccatcaagccgaacaccaag
ctggttcatctggagacgccagccaacccgaccctgaaggtcaccgacatagcgagcgtg
acgtcaatcgcccgcgaggcgcaggaacggcttggccatgacatcctcgtcagcgtggac
aacaccttcaattcgccgtacaacgtacgcccgctggaactcggcgcggacatcgtggtg
gagagcctcaccaaatacatcaacggccatggagacgccctcggcggcatgatagccacc
accaaggcccgaaccgacgaaatccgcttcaccgcccaggtcaactacggcggcatcatc
agcccgttcaacgcatggctgatcaaccgaggcacggtaacgctcccgctgcgcatgaag
cagcacaacgcctcggcacaggccatcgccgaacatctcgaacggatcgacgcggtacgg
ttcgtcagctatccgggactcgaatcacacccgggacacaccgtggcaaccagccagaag
gcccacccggcggccggatacggcggcgtactcgccttcgggctcaatacggaccacgaa
ggccacaaccggttcgtctccaagctcaacgtcatcacctcggcggtctcgctcggacat
gacgagagcctgatcgtgttcctcggagaggacgacgaacgccaatacctgtacccgcag
gagttccatcagggcttcttccgccttgcagtcggactcgaagacaccgacgatctgatc
cgagacatcgaccacgcactcacggaagccggattgatggaatag
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