Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0541
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Entry
BBDE_0541 CDS
T04222
Name
(GenBank) beta-1,4-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00520
Amino sugar and nucleotide sugar metabolism
bdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BBDE_0541
Enzymes [BR:
bdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
BBDE_0541
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Gene cluster
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Glyco_hydro_32N
Motif
Other DBs
NCBI-ProteinID:
BAQ26535
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Position
669520..671151
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AA seq
543 aa
AA seq
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MQISNPVLTGFHADPSMIRVGDTYYIANSTFEWFPGVRLHESKDLVHWNTLPSPLSRVSQ
LDMKGNPSSGGIWAPDLSYADGRFWLIYTDVKVVNGAFKDCVNYLVTADDIRGPWSDPIR
INGVGFDSSLFHDDDGRKYLVQQTWDFREYHHSFNGITLTEFDVDAMRLKPETARTIWDG
TAVKVVEGPHLYRKDGWYYLFAAEGGTQYEHQESVARSRTLDDHSFEAMPDGPFIGNYDT
PDFYLQKQGHGALVDTPSGEWYYASLCGRPWRHATEPSHGVRGWCTLGRETSIQKVEWDE
DGWPRVVGGRAGQRYVDAPKDAIETAAPLSRDEHDEFESDMLGVNWNTVRVPFTEAMGRV
GGGKLTLRGQGSLCNAFEQSMVARRWQAFDFDAETKVRFDPNNYMQMAGLTNYYDDLCWS
WAFVTWDEGRGTRVIEVAQNDFNQYTSFLKDNAIEVPRDAEAVWLRTKVRTEYYSYEYSF
DGEHFTEIPVRLDAKILSDDYVVQRYGGFFTGAFVGLACVDLSGYGLTAEFDYFDYKELP
DCE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttccaaccccgtactcaccggcttccacgccgatccgtcgatgatccgagtc
ggcgacacctactacattgccaattccaccttcgaatggtttcctggcgtgcgcctgcac
gaatccaaggatctggtgcattggaacacattgcccagcccgttgagccgcgtcagtcag
cttgacatgaagggcaatccatcatccggtgggatctgggctcccgacctgagctatgcg
gatggcagattctggctcatctacaccgacgtgaaggtggtcaacggcgcattcaaggac
tgcgtcaactacctggtcaccgccgacgacatccgtgggccgtggagcgatccgatccgc
atcaacggcgtcggcttcgattccagcctgttccacgacgatgacgggcgcaagtacctt
gtgcagcagacttgggatttccgcgaatatcatcattcgttcaacggcatcacgcttacc
gaattcgatgtggatgccatgcggctcaagccggaaacggcacgaacgatctgggacggt
accgcggtgaaggtggtggaaggcccgcacctgtacaggaaggacggttggtattacctg
tttgcggccgaaggcggcacccaatatgagcatcaggaatccgtggcccgctcgcgtacg
ctcgacgaccattccttcgaggccatgcctgacggtccgttcatcggtaactacgacact
cctgacttctacctgcaaaagcagggacatggtgcgctcgtggacacgccatcaggggag
tggtattacgcgtccctatgtggtcgcccgtggcgtcatgccaccgaaccgtcgcatggc
gtgcgcggctggtgcacgcttgggcgcgaaacctccattcaaaaggtggagtgggatgag
gatggctggcctcgcgtggtcggaggccgtgcaggtcaacggtatgtggacgctccaaag
gatgccattgaaaccgcggctccactaagtcgcgacgaacatgacgaattcgaatccgac
atgcttggcgtgaactggaacaccgtacgtgtgccgttcaccgaagccatgggcagggtc
ggcggcggcaaactgacgttgcgaggacagggatccctgtgcaatgcattcgaacagtcg
atggtggcccgccgctggcaggcgttcgacttcgatgccgagacgaaggtgcgtttcgac
ccgaacaactacatgcagatggccggactgacgaactattacgacgacctgtgctggtca
tgggcgttcgtgacctgggatgagggacgcggaacgcgcgtcatcgaagtggcgcagaac
gacttcaaccagtacacctcgttcctcaaagacaacgccatcgaagtacctcgggatgcc
gaagccgtatggctgcgcaccaaggtacggacggaatactattcctacgaatactccttc
gacggcgagcatttcactgagattccggtgcgactggacgctaagatcctctctgatgat
tacgtcgtgcagcgatatggcggcttcttcaccggagcattcgtcggccttgcctgcgtg
gacctgtccggttacggcttgacggccgaattcgactacttcgactacaaggaacttcct
gactgcgaatag
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