Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0603
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Entry
BBDE_0603 CDS
T04222
Name
(GenBank) prolyl-tRNA synthase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBDE_0603
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdn01007
]
BBDE_0603
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdn03016
]
BBDE_0603
Enzymes [BR:
bdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
BBDE_0603
Amino acid related enzymes [BR:
bdn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BBDE_0603
Transfer RNA biogenesis [BR:
bdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BBDE_0603
Prokaryotic type
BBDE_0603
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
DUF1198
Motif
Other DBs
NCBI-ProteinID:
BAQ26597
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Position
727704..729512
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AA seq
602 aa
AA seq
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MFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLTVLNKIENIIREEMASID
AQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTLLVKDLYSSY
KDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMDERGAYERIF
DRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALTTPEPEAIDC
TDTPAAEKRPTPDAATIDKMVEFANANHPRSDGRAWQASDILKNVVIAVMHPQDDNHDEP
WRELVVVGVPGDRSVDMKRLEAQFTPAEIEEATEEDLKKHPELVKGYIGPMALGPQARDG
KKAEAAEETGEALRYFVDAHIARGSAWFTGADEHEVDYYDLVYGRDFEADGTVEAVEVRH
GDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGSYGIGVSRVM
ACIAETHHDDKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIAELEAKGIEVIFDDRKK
VSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQVIADRVAAL
LQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcgtaccctgcgcgaggaccctgccgatgccgacgtcgtgtcggacaagctc
ctgcagcgcgcctgctacctgcgcaaggccgccccgggcatctggacctggctgccgctg
ggcctgaccgttctgaacaagatcgagaacatcatccgtgaggagatggcctccatcgac
gcccaggaggttcatttctccggcctgctgccgcgcgagccgtatgaggccacccaccgt
tgggaagaatacggcgacaacatcttccgattgaaggaccgtcatgaagccgactatctg
ctggcgccgacccatgaggaaatgttcaccctgctggtcaaggacctgtattcctcgtac
aaggacctgccggtgaccctctaccagatccagaccaagtaccgcgacgaattccgcccg
cgtgccggtctgatccgaggccgcgaattcattatgaaggatgcctactccttcaccctt
gacaaggaaggcctcgtcaaggcctatatggacgaacgcggtgcctacgaacgcatcttc
gaccgccttgacctgaagtatgtgccggtgcatgccatggccggtccgatgggtggcttc
gaatcagaggaattcctggctccgatggagatcggcgaggacactttcgcgcagtctccg
tccggcaaggcttggaacgtcgaggcgttgaccactccggagccggaagccatcgattgc
accgacaccccggccgccgagaagcgtccgaccccggatgccgccaccatcgacaagatg
gtcgaattcgccaatgccaaccatccgcgttccgatggtcgtgcgtggcaggcctccgac
attctgaagaacgtggtaatcgccgtcatgcatccgcaggacgacaaccatgacgaaccg
tggcgcgaactcgtggtcgtaggcgtgcccggcgatcgttcggtcgatatgaagcgtctc
gaggctcagttcaccccggccgaaatcgaagaggccaccgaagaggatctgaagaagcat
ccggaacttgtcaagggctatatcggcccgatggcgctcggtccgcaggcccgtgatggc
aagaaggccgaagccgccgaagagaccggcgaagcgctgcgatacttcgtggatgcgcat
atcgcccgcggttccgcgtggttcaccggcgccgacgaacatgaggttgactattatgac
cttgtctacgggcgtgactttgaggccgatggcaccgtcgaggccgttgaggtgcgtcac
ggcgatatgagcccggacggttccggcccgttgagcttcgagcgtggcgtggaaatcgga
caggtgttccagctgggcctgaaatactccaacgcccttggtttgaaggtgctcgaccag
aacggcaagaccgttccggtgtggatgggttcctatggcatcggtgtgtcccgtgtgatg
gcctgcatcgccgaaacccaccatgacgacaagggtctggcttggccggccgtcatcgcc
ccggcccaggtgcatgtggtcgctaccggcaaggatgcggcagcgttcgaagccgcggaa
cagctgatcgccgaactcgaggccaagggcatcgaggtcattttcgatgaccgtaagaag
gtctcaccgggtgtgaagttcaaggatgccgagctgatcggcgtaccgctgatcgccgtt
gccggccgcgacaccgtgaacaatggcaccattgaagtgcgcgatcgcaatggcgagaac
gccgaggcggtgccggtcgccgatgcggcgcaggtgattgccgaccgcgtcgcagctctg
ctccaatag
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