Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0739
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Entry
BBDE_0739 CDS
T04222
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBDE_0739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdn03019
]
BBDE_0739
03110 Chaperones and folding catalysts [BR:
bdn03110
]
BBDE_0739
03029 Mitochondrial biogenesis [BR:
bdn03029
]
BBDE_0739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdn04147
]
BBDE_0739
Enzymes [BR:
bdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BBDE_0739
Messenger RNA biogenesis [BR:
bdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BBDE_0739
Chaperones and folding catalysts [BR:
bdn03110
]
Heat shock proteins
HSP60 / Chaperonin
BBDE_0739
Mitochondrial biogenesis [BR:
bdn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BBDE_0739
Exosome [BR:
bdn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BBDE_0739
Exosomal proteins of other body fluids (saliva and urine)
BBDE_0739
Exosomal proteins of breast cancer cells
BBDE_0739
Exosomal proteins of colorectal cancer cells
BBDE_0739
Exosomal proteins of bladder cancer cells
BBDE_0739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAQ26733
LinkDB
All DBs
Position
885610..887226
Genome browser
AA seq
538 aa
AA seq
DB search
MAKIIAYDDEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID
LDDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVTAGSNPIALRRGIE
KASEAIVKELVAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR
FGLDLDFTEGMRFDKGYIAPYFVTNAEDQTAVLEDPYILLTSGKLSSQQDVVHVAELVMK
TGKPLMIIAEDVDGEALPTLILNTIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS
DELGLKLDSIDMSVLGTAKKIIVSKDETTIVSGGGSKEDVAARVAQIRAEIANTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKAQKDVQLEGDEATGAAIVFRAIEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAAT
NEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPAAAPAAGADMGY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgcatacgacgacgaagcgcgtcagggaatgctcgcgggcctcgac
aagctcgccgacaccgtcaaggtcacccttggcccgaagggccgcaacgtggttctggac
aagacctacggcgccccgaccatcaccaacgacggcgtttccatcgccaaggaaatcgac
cttgatgacccgtacgagcgcatcggcgccgagctggtcaaggaagtcgccaagaagacc
gacgatgtcgctggcgacggcaccaccaccgccaccgtgctggcccagtctttggtgcat
gaaggcctgaagaacgtcaccgccggctccaacccgatcgccctgcgtcgtggtatcgag
aaggcttccgaggccatcgtcaaggagctcgtcgcagctgccaaggacgtcgagaccaag
gatcagatcgctgccaccgcaacgatctccgccgcggatccggaagtcggcgagaagatc
gccgaagcgctggacaaggtcggccaggatggcgtcgtgaccgtcgaggacaacaaccgc
ttcggcctggatcttgacttcaccgaaggcatgcgtttcgacaagggctacatcgccccg
tacttcgtgaccaacgccgaggatcagaccgcggtgctcgaagacccgtacatcctcctg
acctccggcaagctgagctcccagcaggatgtcgtgcatgtggccgagctggtcatgaag
accggcaagccgctgatgatcatcgccgaggacgttgacggcgaggctctgccgaccctg
atcctgaacaccatccgtggcacgttcaagtcctgcgccgtcaaggctccgggcttcggc
gaccgccgtaaggccatgctgcaggatatggccatcctgaccggcgcacaggtcgtgtcc
gacgagctgggcctgaagctcgactccatcgacatgtccgtgctcggcactgccaagaag
atcatcgtctccaaggacgagaccaccatcgtgtccggtggcggctccaaggaggacgtg
gcagcccgcgtggctcagatccgcgccgaaatcgccaacaccgactccgactacgatcgt
gaaaagctgcaggagcgcttggccaagctggccggtggcgtcgcggtcatcaaggtgggt
gccgccaccgaggtcgaggccaaggaacgcaagcaccgcatcgaggatgccgtgcgcaac
gccaaggccgccatcgaggaaggcctgctgccgggcggcggtgtcgctctggtccaggct
gccgccaaggcccagaaggacgttcagctcgaaggcgacgaagccactggcgccgcaatc
gtgttccgcgccatcgaggccccgatcaagcagatcgccgagaacgccggcctgtccggt
gacgtggtgatcgacaaggttcgctctctgcccgacggtcagggtctgaacgccgccacc
aacgaatacgaggatctactggccgccggcgtcaccgacccggtcaaggtcacccgttcc
gccctgcagaacgcagcctccatcgcaggcctgttcctgaccaccgaagctgtggtggcc
aacaagccggaaccgccggcagccgctccggccgctggcgccgacatgggctactga
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