Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0802
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Entry
BBDE_0802 CDS
T04222
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
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Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
KdpC
Motif
Other DBs
NCBI-ProteinID:
BAQ26796
LinkDB
All DBs
Position
962239..964353
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AA seq
704 aa
AA seq
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MPDTVFEEDALADNVSEYSEEEERPLTFAELGVPGPLVRVLAADDKKTAFPIQADTLPDS
LAGRDVLGRGRTGSGKTLAFSIPMVARLGEVDADEYENMSQFRHEVKRVQQGHAEERRSE
DFVPRPRGLVLAPTRELANQINDVLTPLAQIYGMSTTTIYGGVRYARQIRDLQAGADIVV
ACPGRLEDLIQQHALTLENVQVAVIDEADEMADMGFLPPVKRLLAQVSFDAQIMLFSATL
DHGVDEVVNTFLSDPKVHSVDSATAAVDEMTHHVFETTQAERAELVRTLASGSGRRILFT
RTKFQTQKLAKDLTKRGIPAAELHGNLSQNQRDRNLAAFESGDVNVMVATDVAARGIDVS
GVELVVQVEPPEDSKSFLHRSGRTARAGKSGDVVTIVLPNQRRRTRRLLHEAGLKIKPIE
VTHDSPEVLELVGEVAEPVFGWTLEQSQPTGNPRRKRSGRDNAERGDRFGRSNRSGGRNK
DRGKDKGGKPFKSERGDRNERSERHSDTYEERFKPARNRAERRAEKFRGRDNREAIAREE
RWENPEVQETRRDEHERKRNDKRREKYARLHEQQRTEADEPQEFGRRGSSGKKAKQSRKQ
FDKRQGAPSKKQRKADAREQRRFADDRQGGRYGRADRDGYHDGQQGGGKRIHRKEIRVIQ
DERSGDAKRHDRRMEAKRGERHDKHAGKPFRKHAKIRKAPFRAR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgataccgtttttgaagaagatgccctcgcggacaatgtgtccgaatatagcgag
gaagaggagcgtccgctgaccttcgccgagttgggcgttcctggcccgctcgtacgcgtg
cttgcggcggatgacaagaagaccgcgttcccgatccaggcggatactctgccggattcc
ctggccggtcgcgatgtgcttggccgtggccgtaccggctccggcaagaccctggcgttc
tccattccgatggtcgcccgccttggggaggtggatgccgacgaatacgagaacatgagc
cagttccgtcatgaggtcaaacgcgtgcagcaaggccatgccgaggaacgtcgttccgag
gatttcgtgccgagaccacgcggcttggtactcgcccccacccgcgagcttgccaatcag
atcaatgacgtgctgacgccgttggcgcagatctatggcatgagcaccaccacgatttac
ggtggcgtgcggtatgcccgccagattcgcgacctgcaggccggcgccgatatcgtggta
gcctgcccgggtcgactcgaagacctgatccagcagcatgccctgaccttggagaacgtg
caggtcgccgtaatcgatgaggcggatgagatggccgacatgggcttcctgcccccggtc
aaacgactgctcgcccaagtgtcgttcgatgcgcagatcatgctgttctccgccacgctc
gaccatggtgtggatgaggtcgtgaacacgttcctgtccgatccgaaggtgcatagcgtc
gattccgccaccgcggccgtcgatgagatgacccaccatgtgttcgagaccacgcaggcc
gaacgtgccgagctggtacgtacgctcgcttccggctcgggccgtcgcatcctgttcacc
cgtaccaaattccagacgcagaaactggccaaggacctgacgaagcggggcattcccgca
gccgaactgcatggcaacctgagccagaaccagcgtgaccgcaatcttgccgccttcgaa
tccggcgatgtgaacgtgatggtcgccaccgacgtggccgcacgaggcattgacgtgagt
ggcgtggaactcgtggtacaggtcgaaccgccggaggattcgaagtccttcctgcaccgt
tccggtcgtaccgcacgagccggcaaatccggtgacgtggtcaccatcgtattgccgaac
cagcgccgtaggacccgtcgcctgctacatgaggcggggcttaagatcaagccgatcgaa
gtgacgcatgattccccggaagtgcttgagctcgtaggggaagtggccgaaccggtattc
ggctggacgctcgaacagtcccagccgacgggcaatcctcgtcgcaagaggagcggcagg
gataatgccgagcgcggtgatcgtttcgggcgttcgaaccgttccggcgggcgcaacaag
gatcgcggtaaagacaagggcggcaaacccttcaaatccgagcgcggcgatcgcaatgaa
cgttccgagaggcactccgatacctacgaggagcgtttcaagccggcgaggaatcgcgcc
gaacgtcgtgccgaaaagttcagagggcgagacaaccgagaggccatcgcccgtgaggaa
cgttgggaaaatcctgaagtccaggaaacccgtcgcgacgaacatgaaaggaagcgcaac
gacaagcgtcgcgaaaagtacgcccgtctccatgagcagcagcgcaccgaggcggacgaa
ccgcaggaattcggccgtcgcgggtcttccggcaaaaaggccaagcagtcccgtaagcag
tttgataagcggcagggcgctccttccaagaagcagcgcaaagccgacgcgcgagagcag
cgccgtttcgcagacgaccgtcaaggcggccgctacgggcgtgccgatcgcgatggatac
catgacgggcaacaaggtggcggaaagcgcatccaccgcaaggagattcgcgtgattcag
gacgagcgttccggagacgcgaaacgccatgatcgtcgtatggaggccaaacgcggtgaa
cgtcacgacaagcatgccggcaagccgttccgcaagcatgcgaagattcgcaaggcgccg
ttccgtgcgcgctga
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